YALI0F05803g

Overview

Description highly similar to uniprot|Q01855 Saccharomyces cerevisiae YOL040c RPS21 40S small subunit ribosomal protein
Locus type CDS
Locus tag YALI0F05803g

Location

Species Yarrowia lipolytica Positions 862869..863856
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 988 (nuc.)
Previous locus YALI0F05797r Next locus YALI0F05808g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05803g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05803gYALI0F05803g_mRNA-001YALI0F05803g_CDS-001

Nucleotide sequence

 

>YALI0F05803g
TCACATCAAACGACAAAAATGGCTGACGCTTCTGCTGGTACGTATGGACGATAAACGAGA
CCGGCGTATGGAGGACATGTCGAATTACGGTTGGTGCGACACGGCGCCCAGAGACATTGC
GGTGGCATGACAGGGAGGATTGCACGGCGTGGCCCACGGCGTGGCTCCGTATGGGCGGTG
TCACCTGCAACGGGAGCTGTGTGATGATGTGGCATGATAATTGTCATCCGCGACGTGGCA
TGAGGAATCTCAGCCGCGATACGACCTCTGTGATACACGACATAGCTATGTCACTCGCAA
TATGACCTCTGTGATCCACATGATCTGAAATGACACGCTTACGCCCAATTCCCCTGTTCC
AACTAACACAGAATCCCGAAAGGCTCGAACCTTCAAGAAGTTCTCCTACCGAGGCGTTGA
CCTCAAGGATCTGCTCGAGATCTCCACCGACGAGTTCAAGGAGCTCGTTTCCGCCCGAGC
CCGAAGACGGTTCAACCGAGGCCTCAACAAGAAGCCTACCATTCTCATCAACAAGCTGCG
AAAGGCCAAGCTCGCCGCCGGCCCCAACGAGAAGCCCGCCGTGGTCAAGACCCACCTGCG
AAACATGCTCATCTTCCCCGAGATGATTGGCTCTGTTGTTGGTGTCTACAACGGAAAGTC
CTTCACCACCGTTGAGATCAAGCCCGAGATGATCGGCATGTACCTCGGTGAGTTCTCCAT
CACCTACACCCCCACCCGACACGGCCGACCCGGTGTCTCCAACTCCAAGTTCATTCCTCT
GCGATAAGGGATTGCATGGTAATAAAAATATGTATTGTATGATTGACATACGCGAACACT
GTGAACTGAGAGCCTCAGAGCCCTGAGAGCCTTGAGAGCCTTGAGAGCAAAGCTCGAAGG
TGTTTCAAGTGCTCTCGGAGTGTGGGCTTATTGTAAATGTATTGGCTGACACGAGAGCAA
AGCTCGAGTGGGTCGTTCTTGTACTTGT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F05803g_CDS-001

Protein length: 145 aa.
Product: Ribosomal 40S subunit protein S15, putative

>YALI0F05803g_CDS-001 MADASAESRKARTFKKFSYRGVDLKDLLEISTDEFKELVSARARRRFNRGLNKKPTILIN
KLRKAKLAAGPNEKPAVVKTHLRNMLIFPEMIGSVVGVYNGKSFTTVEIKPEMIGMYLGE
FSITYTPTRHGRPGVSNSKFIPLR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG