YALI0F04752g

Overview

Description weakly similar to uniprot|B9WBS8 Candida dubliniensis U1 snRNP U1C (U1-C); putative pre-mRNA splicing complex subunit
Locus type CDS
Locus tag YALI0F04752g

Location

Species Yarrowia lipolytica Positions 736966..737738
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 773 (nuc.)
Previous locus YALI0F04730g Next locus YALI0F04774g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04752g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04752gYALI0F04752g_mRNA-001YALI0F04752g_CDS-001

Nucleotide sequence

 

>YALI0F04752g
CGATATTGACCCTTAAATCAACTCAACCAACAATCCAACATGCCTAAGATGAGTATCCAT
TGAACGGAGCCGATTGAATCTGCGTCTGTCTGTTTTCCCTTTTTGTTTTATTCCCCCACT
AACCTACCCCTATTGCGATTATTGCGACACCCGAATCACACCCGACACGCTGGCGGTGCG
AAAAGCTCACTGCACTGGACGAAGTCATATAGCCCATGTGGTTGACTACTACGAGCGGGC
AGCCCAGGAACTTGGTCTGTTCCCTCGAGACATGCCGTCGACGCTTTCGCAGACGCAGTT
TCGGCGCTACAACGAGAAACTGGGAGATGCTCCGTCTCCTAACAAGGACGTGTTGCCACT
AAAGACAGGAACCAAGCCTGCTGTGCCTGGATTTGACCCGGTGTTGAATCAGTCGGCACA
GCTGAACTCGATTCTATACAGTGGAGCTCCCGGATACCAGCCCCCTGCCCCGGTAGGAGC
TCCTATGGTGAGCAAGAAAGGCAAGAAGGTGTTGCCGGTGCCTCCTCATTGTGGAAACCT
GCCGCCGCCTCCGGGTCTATTTTACTCTTAGAGCAGAGCATATCCCGAGCACCCGGTGCG
AATGGTGTGCTGATGCGACAATGTGAGTACCACTCTCTAGGATGTAAAGCTCCAGAACAG
TTGTCTACGACTCTGAACCCTCGGATCTTTGTCAGCCCATCCCCAGTGACTGCTAGACTT
TTCAGAACTGCTACATCTGGCTTATTTATTAATAATGCATGATTCCATTTACT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F04752g_CDS-001

Protein length: 151 aa.
Product: Conserved hypothetical protein

>YALI0F04752g_CDS-001 MPKPYCDYCDTRITPDTLAVRKAHCTGRSHIAHVVDYYERAAQELGLFPRDMPSTLSQTQ
FRRYNEKLGDAPSPNKDVLPLKTGTKPAVPGFDPVLNQSAQLNSILYSGAPGYQPPAPVG
APMVSKKGKKVLPVPPHCGNLPPPPGLFYS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG