YALI0F04686g

Overview

Description weakly similar to uniprot|Q0UJZ8 Phaeosphaeria nodorum hypothetical protein SNOG_07916
Locus type CDS
Locus tag YALI0F04686g

Location

Species Yarrowia lipolytica Positions 724547..728108
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3562 (nuc.)
Previous locus YALI0F04664g Next locus YALI0F04708g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04686g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04686gYALI0F04686g_mRNA-001YALI0F04686g_CDS-001

Nucleotide sequence

 

>YALI0F04686g
ATGCTGTTCAAAACCAAACCGAAAGTGGTGACACAAGCACAAACACCACCGCCGCAACCG
CAACCGCCACAGACCCTCGACCTGAGCCTCAGCCTGGAGCCGTCGCTATCGGAAAAAATG
TACCATATTCTCAACCAGGGACCTCTGGGTCTGGTGTCTCTTGACAACCTGGACGACGAC
GACGACCGCTGCAGCGTCGACATGATGGCCATTTTGGAGGAGGGCCCGCGGCGGAGCGAG
GACTCGGTCGACCGTTTCCGCACCCCCCGATCTTCTCTTTGGAGCGAGTCCGACAGTGTC
ACCAGCGACGCCCACGACACCCACGACACCAGTGACACCAACGACACCCGCGACGCCAAC
GACATGGCCAGCGGCGCCAACGGTATGGCCAAAATCACATCCACCACATCCACCACATCC
ACATCAACTGCATCCACCGACGAGCTGGACCCCTCTCTGTCGTCCTCCGTCACCCCAGCC
ACCTCCAACAGCAGCAGTGGCTCCGTTCTACAGCCCATAGGAGAGGACAAGATGGGAGAG
GAAGGAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCA
GAAGCAGAAGGAAACACAAGCATCAGCACCATCGACGCTACGGACGCCGACAATACCGCT
GACACACACAATGTGCTTATCACGCTGACCACGTCCCAGGACTCAGACTCCTCGGTCTCC
TCCTCGGTCTCCTCCTCTGGAGATATCACACAGGCAACGTCATCGTCCTCTCTGACTCCG
TCGCCTCCGTTATCGCCCACCAACAAGTCCTTGTCGTCGCCAAATTTGGCGAACCACTCT
GTACGCGCAGAGACTCGTTCGGCGTCATCCAGCGGTCTTCTTGAGTCGCCACTGCCACAG
CCGCCTCGAGCGCTCGCGTCTGCGCTCTATGTGTCTCAGAACCCCAACGCCAAGTCCCGT
TCACCAGCCGGCTCGCGTTCTGCGTCGCCACACAAACCGGGCCACCGACGTCATCCCTCC
GATGGCTCAGAGGTTCCTTCCACGACAAACACCATGTCGTTTAAGAGTCTCTCGCTCAAG
AGTGACTCGTCGGACTCGGACAGCCACTCCATCCGGTCCATGCGTTCGTTCCGCTCGTCG
TTCCGCTCCTTTTCGCACGAGTCGCTGTTTGCGCTCAAGAAGCGGGATGCAGTGGCCTTG
TCAAGCACATCATCACCGTTGACGCCCATTTTTTCCAACGCTTCCACCAACTCTCCGAAT
CACGACATCAAGGCGTTGGAGAGTGCCCTCAGCAAGTTCAACGGCAAGCAGGGCACTCCA
AAGGCCAACATTCTACGTATTGAGCTTCTGACGCTGCTTCGCAAGGAGACTCCAATTGGA
GCTTTACCTTCTGATTCCGTTGCCATCTTTTCCAAATGGTGGAAGGCGATTCTCGAAGCT
CTGCACAATCGGCCATCCTCCCACGACAAGATTGCATACATGGAGGCCATCTCCAAGCTC
ATGGACCGGCCCGAGTGGAAGGAGCACAACTCGTCCGTGTTCTGCTCCCTCGTCTACCAG
ACGGTGAGATATTGTTCGGAGAAGCTGTCCTTGAAGTCGGTACCCATTCCCCTCGCCGCC
TTTAGTGGAAAGACGTTTGCCTATGCCTTCTTCCACTGTCCAGGAGTGGCCCACCAGCTT
CTGGCGCATCTTCAGGTCCCAGCTGCAGACCTGGAACGCATCGGACCCATCTGCGACTCT
CCGGTGCTCCGTCCGCCTGTGGACGGCAAGCCCCAGATTCCTCTGGGTCCCTGGATCCGC
CGTTGGGCTTCGTCTGTCTCTGACACCTTTTATTCGTTCTTGAAACACTACTATTGTATT
GGTGGTGGTATGGAGGCCGACGGAGAGCTGCCTCCCGGATGGATCCACGTCCACGGGTTC
ATTCTGGGCTCTCTGGACGCCGTGGTGAGACCGCGGAAGCCACCTGCGCCCCCATCGCTC
ACCCCGTGCATCCCCAAGCCCCGGAAGATTCACAAACTGAAGCTTCTGGGTGCTCTGCGA
GAGCTCAAGAAGTCATGCCACGCCGAGTTCTTTGCCCATGTGCTCGCGCCGGCAATTGAA
GACATTCTCAAGTCCGTGTCGCTCAAAACGGTCGTCTACGACGTGGAGCAGTGCACTGCG
CTGGCCGACCTGGCCGAGGAGATGCTGACGATGCTAGAGTCACCTCTACGGTCGCTGGAC
GCCGCCTTCTGGCTCAATGTCGTGGGCATCATGTTGCGATCCGAATCGCACTACACCACA
TTGCGAGCCTTGGCCTTTTTGCACAACACATTCCCCCACAATGATCCAGGTGCGTCGTCG
ATGTATGCGGATTTCATTTTGGAGCCGGATACGCTGAAAAAGTACTTTTGCCACTGGCAC
CCACTGATTCGGGCAGCATACATGCGGGTTGTGTGCTACCGGGTGCTTCCCAAGGCGCCC
CAGAAGATGAACCACTCTCTGGTGACTGTGTACACGCGGCTCATCACGTACATGGAGTAC
TGCCGAGTGAAGGAGACGCCCTTGCCCGTGACCGACGCATGTTCGCGGCTGCGGATTGTG
TCACGTGACTTTGAGGCTTCGAACGTGGATCTGGTGGTTCAAAATCTGCAGAATCTCGAT
TTTGTGGATATTGGTGTGAGGGGCCGAGGGTTTGAAGGGCGGCTGATGGAGCCTGGAACT
CCCCCTAGAAGTTCGGGCGGCTCATCTGAGGTTCTGACCCCCACGGGTGCTCTCACGCCC
TCTGGAAGCGGTGCCATGACTCCTGGCGGGTCTACCACCTCTCCCTTGGCCTCTCGAACT
TCTCCCAGTGTTACTCCGCGATACTTTGAGGACTCGCCGCCTCGAGTGTCGGCGTTTGAT
GTGGAGGACGATCTGTTTGAGGGTGTGGAAAAGACCACCGTCAAAAAGTGGGGTTTTCTG
CGCAAGGAGGTGTATGCTCATGACGAGCATGTCGATACTGGAGCCCATTCTGTGTCCCAG
TCGTCGCCCAACGGCATTTCTTCTCAGTACAAGTTTGTAATGGAGTCCACATCTAGGTCC
AAGACCCCTCCGGGCTCTGAGAACTTTGCCAATGAGGAGCCGTCGGTCGCGTATCCTCGG
CTGCCGTTTGATCTGAAGGACAAGACCAAGGACTCGCAGTCGACTCTGGATTCCGCCACC
ACTGCCACCACGTCCAACACGTCTGTGGACGACGATGCGTTCCGAGTGCCTCTTGATCTC
GACGAGTTTAAGGATCTGACTGAGTATGTCAAGTACTGGAAGTATGCCGGCAGGTCGTTG
AACGAGTGGGACGGCGTGGTGAGAGAGTATGAGACGTTTGTGACGCAACATGGAGGAGCA
GGAGTACCCCATATGGTGGGAGATATGGGCAGATGTGCGCCATTATAGGGTCTGGGCGCT
GAAGAGCCGCTTCAGAGCAAACTGTCGCCGTGCGATCACCGGGGTGATTGGGTTGCAGTC
TCTCCGTTCCGCAGCTGGGCAGCGCCCGTTGTGGCCCGTTGTAAATTATTTATTGCATTG
TTAACATGACCAGTGTGTCGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04686g_CDS-001

Protein length: 1136 aa.
Product: Conserved hypothetical protein

>YALI0F04686g_CDS-001 MLFKTKPKVVTQAQTPPPQPQPPQTLDLSLSLEPSLSEKMYHILNQGPLGLVSLDNLDDD
DDRCSVDMMAILEEGPRRSEDSVDRFRTPRSSLWSESDSVTSDAHDTHDTSDTNDTRDAN
DMASGANGMAKITSTTSTTSTSTASTDELDPSLSSSVTPATSNSSSGSVLQPIGEDKMGE
EGEAEAEAEAEAEAEAEAEAEAEGNTSISTIDATDADNTADTHNVLITLTTSQDSDSSVS
SSVSSSGDITQATSSSSLTPSPPLSPTNKSLSSPNLANHSVRAETRSASSSGLLESPLPQ
PPRALASALYVSQNPNAKSRSPAGSRSASPHKPGHRRHPSDGSEVPSTTNTMSFKSLSLK
SDSSDSDSHSIRSMRSFRSSFRSFSHESLFALKKRDAVALSSTSSPLTPIFSNASTNSPN
HDIKALESALSKFNGKQGTPKANILRIELLTLLRKETPIGALPSDSVAIFSKWWKAILEA
LHNRPSSHDKIAYMEAISKLMDRPEWKEHNSSVFCSLVYQTVRYCSEKLSLKSVPIPLAA
FSGKTFAYAFFHCPGVAHQLLAHLQVPAADLERIGPICDSPVLRPPVDGKPQIPLGPWIR
RWASSVSDTFYSFLKHYYCIGGGMEADGELPPGWIHVHGFILGSLDAVVRPRKPPAPPSL
TPCIPKPRKIHKLKLLGALRELKKSCHAEFFAHVLAPAIEDILKSVSLKTVVYDVEQCTA
LADLAEEMLTMLESPLRSLDAAFWLNVVGIMLRSESHYTTLRALAFLHNTFPHNDPGASS
MYADFILEPDTLKKYFCHWHPLIRAAYMRVVCYRVLPKAPQKMNHSLVTVYTRLITYMEY
CRVKETPLPVTDACSRLRIVSRDFEASNVDLVVQNLQNLDFVDIGVRGRGFEGRLMEPGT
PPRSSGGSSEVLTPTGALTPSGSGAMTPGGSTTSPLASRTSPSVTPRYFEDSPPRVSAFD
VEDDLFEGVEKTTVKKWGFLRKEVYAHDEHVDTGAHSVSQSSPNGISSQYKFVMESTSRS
KTPPGSENFANEEPSVAYPRLPFDLKDKTKDSQSTLDSATTATTSNTSVDDDAFRVPLDL
DEFKDLTEYVKYWKYAGRSLNEWDGVVREYETFVTQHGGAGVPHMVGDMGRCAPL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG