YALI0F04532g - CTS2

Overview

Description uniprot|Q6C2W7 Yarrowia lipolytica YALI0F04532g CTS2 Endochitinase
Locus type CDS
Gene name CTS2
Locus tag YALI0F04532g

Location

Species Yarrowia lipolytica Positions 690361..692759
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2399 (nuc.)
Previous locus YALI0F04488r Next locus YALI0F04543g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04532g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04532gYALI0F04532g_mRNA-001YALI0F04532g_CDS-001

Nucleotide sequence

 

>YALI0F04532g
ATGAAAAACGTCATTTACTTTTGCAAGTGAGTATTGCACCGACTGAGGCTTGTTAATGGG
GCTGGAGGAGGTGAAGGGAAGAAACGCGGTCCGAATTGGTGGCAAAATGGGGGTTTGGGG
CAGATGTGGGGGCTATGGGGGTGTTGCGATAATAGGAGATTTAGAGTGGTTGAGATGGCT
CTGGGGTGGTTCAGAAACAGTCTAGAAACAGTCTAGGAACGGTTTTGGGTCAGTATAGCA
GCTATTATGGACTTTTTTCGAGTCAATTGGTCCAGTGGATTGATTCTATGTTGCACCAGG
ACAGTTCGAGTGCTACTGGATTTTACAGTGGTCTAACGACGATTGTGGACCGTTGGGGTA
ACGACAATTGTGGATCATTGGGGTAATGACAATTGTGGACCATTGGGGCTTTTAATGAAT
GGGTAACTGGGATCATGTGACTTGAGAGGTGATTGTGATATGGATGAGAGTGGCAGCGAG
ACAGACAATGTAAGATTGAGCAAGATATGCCCTTACGATCTTTCCTGATTTTGTTGTTTG
ACAAGAATTGTCTTGGTGAAGATCAAAGTGATGAACTTGTTACGCCACCAAATGTTTTGC
CTGTTGTTTCCCATAGTTTGCCTGTCTTCAACAGTCTCCTTTTTTTGGTTCCTTTTTTCA
CTATCTTGTTTCTATATCAGCCTCCTGGTCCATCTGCCTTCTGCCATATCAAAGAGCTGC
TCTAGACTGTTCTGATCGCTGGATCTACTCTTCATACACACCTCGCCATGACTGAGGTCA
CAGACTGCTACCACCTCTTCTTCTGAATGTTCAGACCAACGGATTTCTTCAGAAGGTGGT
GCCATCCCCCCTTACAACTCATTGACCTACATTTTCTAACCCAGCTGGTCAATCTACGCA
CGAAAACACCTGCCATGGGAAATCCCGTGCTCGTCAACCACCCACATCATCTACGCCTTT
GCCAACTGCGATCCTCTCACGGGCGAAGTGCAACTGTCAGACAAATGGGCCGATGAGCAA
ATTGTGTTTGAAAACGACAAATGGACCGACGACTCAGAAAAGCAGCTCCACGGCTGCTTT
TACCAGTTCAACCTGCTCAAACGACAGCACCGACAGCTCAAACTTTTCCTCTCCATCGGA
GGATACTCGTTTGCCGGAAACTTTGCCGAGATGGCCAAGGACGAGACCAAACGGAAACGA
TTTGCCGAGTCAGCAGCTCAGCACGTGATCAATCTCGGTCTCGACGGCATCGATCTCGAT
TGGGAGTACGCCGACACGGACGAAAAGGCCCAGCAGTACGTGGAGTTGCTTCGTGCGGTG
CGTCTCGAGCTCGACAGTGTAGCTCTCAAGACGGGACTTGATCGACACACGTTTGGGCTG
TCTATTGCTGCTCCGGGCTCCGTCTGGTATGCCAAGCATCTCAAGATTGCTGAAATGGAC
CAGTTTCTGTCCTTCTGGAACATTATGGCGTACGATTTCGCTGGGTCTTGGTCACCGCAA
TCGGGCCACCAGAGTAATCTTTATGGAGGAGAAATCAGCGTCGATCAGATTATGAACTAC
TATGTTCAGAATGGAGTGGCTTCTGAGAAGCTGATTCTAGGAATGCCTATCTACGGAAGA
TCTTTTGCCGGCACTGACGGCCTCAATAAGCCGTACACTTCTGTGGGAGAAGGTACCCAG
GAGGAGGGTAGCTGGGAACGCGGAGTCTGGGACTATAAGAAGCTTCCTCGGCCGGGTTTC
GAGGCCCATTTCGACGACCAGTGCAAGGCGTCGTACCTTTACAACAAAGATACAAAGACT
CTCGTGACTTATGATGACGTGAATGTCGTCAAGCTCAAGTCGGAGTACGTGCGACAGAAG
AATCTGGGCGGAGGAATGTGGTGGGAGTCGTCTGCCGATGGGGCCGGAGATCAGAGTCTG
ATTTTGAACTTCGTCGAGGGCCTGCATCTGGACAAGGAAGAAAATTGTCTCCATTATCCC
CAGTCCGAGTGGAGAAACATTAACAATTGACTCGGAGAAGGGAATGGGACGGGAGGAGTA
AGTGTCTGGCTGCTACTGGGATTGACTGTGGTGGCTTTGTTGGTTGTCAGGTGGTTTAGA
AAGGTCCTAAGTCGTAGTTAGTTGTGGTACTCCATTTTTGGCCATTTAGACGACTCACTT
TGTCAGCGAGACCGGCGTACTCTGGAAGGATATAGACGTCCACAAGGAGAAAGTCGAGCA
CATTTCAAACTTGATCTCATCTGTCTTACAAACATGTCAGAGATTCGACGATTAGGAGAC
TGACTTTACAACTTTTGCTGGAGCTTTAGTTAAGAAATTAGAACGATATTAGTTAAGAGG
GAAAAGTTCTACATCAAGGAACGTCAATGTTGCCCTAGAGATTCAAATTTTTTTCTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04532g_CDS-001

Protein length: 384 aa.
Product: Endochitinase
Gene: CTS2

>YALI0F04532g_CDS-001 MKNVIYFCNWSIYARKHLPWEIPCSSTTHIIYAFANCDPLTGEVQLSDKWADEQIVFEND
KWTDDSEKQLHGCFYQFNLLKRQHRQLKLFLSIGGYSFAGNFAEMAKDETKRKRFAESAA
QHVINLGLDGIDLDWEYADTDEKAQQYVELLRAVRLELDSVALKTGLDRHTFGLSIAAPG
SVWYAKHLKIAEMDQFLSFWNIMAYDFAGSWSPQSGHQSNLYGGEISVDQIMNYYVQNGV
ASEKLILGMPIYGRSFAGTDGLNKPYTSVGEGTQEEGSWERGVWDYKKLPRPGFEAHFDD
QCKASYLYNKDTKTLVTYDDVNVVKLKSEYVRQKNLGGGMWWESSADGAGDQSLILNFVE
GLHLDKEENCLHYPQSEWRNINN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG