YALI0F04466g

Overview

Description similar to uniprot|U1GFD0 Endocarpon pusillum hypothetical protein EPUS_04729
Locus type CDS
Locus tag YALI0F04466g

Location

Species Yarrowia lipolytica Positions 688741..689552
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 812 (nuc.)
Previous locus YALI0F04444g Next locus YALI0F04488r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04466g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04466gYALI0F04466g_mRNA-001YALI0F04466g_CDS-001

Nucleotide sequence

 

>YALI0F04466g
ATGTTACCTATCTGTAGGAGGATAAATACCCCAGCGGTGCGCACCCTCTTTGCTTCCGGG
TCTCTACACTGGCGCAAAATGACCGTTTCTGTGATCCAGGACCTGCTGGCGTCGCCCTCT
GTGTCTCAACGCGACAAGGATATTCTGGCCATTCCCGAAGCCCAGACCCACTGGCAGTCG
TGGGCCGATCTTCAGCACGTGATCAGACACAATGAGCTGCACCGGTTGTCGCGGTCGGCG
TCGCAATTGGCCGACTACATTCTGTGGAAGCGCGATATCGAGTCCAAGTACTCGGGAGGA
GTCATGGAGTACATTTTGGTGGACAAGTTGGGGTGGACTTCGAGCCTGGAGAAGCGGCCC
GTGGCGTACAGCGATGAGCTGTTTGGCGACCCACGTGACGTGCGGATTCTGTTGAACGAC
TTTCCCTACGCCATGGAGAAGGGTCTGGTCCACGTGGTGGTGTGGTCACGAGCCAAGATC
CCCAAGGAGGGCGACAACGGCGACATCACCACCGAGTCTCGTGACAAGCTGGAGCGGTTT
GTGCACGACACGTTTGTGCGGGGTCTGGGAATGACGGGCGACTCTGTCTTATGGTTCAAG
AACTGGGCTGCTCTTCAGAGCATTCCTTTGGTGGAGCATTTTCATGTTTTGTTGAGAAAT
CCGGACATGGACAAGTTGAGCAAGTTGACCCAGTAGCGCTGATGTGCAGATTGACACGAT
GCTGGACGATTGAAGATTGACTGTGTCACTTTACACGATACAGGACTCATAGAGACATAT
ACTAACATAGATAATTCGATAGAGTGATTAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04466g_CDS-001

Protein length: 232 aa.
Product: Conserved hypothetical protein

>YALI0F04466g_CDS-001 MLPICRRINTPAVRTLFASGSLHWRKMTVSVIQDLLASPSVSQRDKDILAIPEAQTHWQS
WADLQHVIRHNELHRLSRSASQLADYILWKRDIESKYSGGVMEYILVDKLGWTSSLEKRP
VAYSDELFGDPRDVRILLNDFPYAMEKGLVHVVVWSRAKIPKEGDNGDITTESRDKLERF
VHDTFVRGLGMTGDSVLWFKNWAALQSIPLVEHFHVLLRNPDMDKLSKLTQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG