YALI0F04147g

Overview

Description similar to uniprot|Q99344 Saccharomyces cerevisiae YPR066w UBA3 ubiquitin-like protein activating enzyme
Locus type CDS
Locus tag YALI0F04147g

Location

Species Yarrowia lipolytica Positions 629730..631750
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2021 (nuc.)
Previous locus YALI0F04125g Next locus YALI0F04169g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04147g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04147gYALI0F04147g_mRNA-001YALI0F04147g_CDS-001

Nucleotide sequence

 

>YALI0F04147g
ATGCATGAGCTGCATGATCAGATCTGGACCAGTCTCCCTAACTTATTCTCAACAATGACT
GCCGTGAGAAAGTGAGTATGAGCAAAGACACACTGAGACGAGGTCATGTAACCGCGAATG
ATACACAAACATGTGCGACATGACAAGGTCACGTGATCCAGCAAGTCCCGTGGTCCAGAA
ACTCCCGCGACTCCGCGGCCCCGCGACCCCACGACTTTGACAGACCGGAAGCCAGCCAGG
ATCCAGGACCCAAGTGTATTGTGTGCCACAAACAGCGAGCAATTGTCACACACACACACA
CACACACATACACACACGTCCACGGCGATATATCTGGTCACGTGACAATGGTATCGCTGG
TGCTCTGTCATTTCCATAGTTACGGCTTGGGGTGGCGATGTGGGGCATGACGTTATCATA
TTGTCTGTGCTAGTCGTGACGACGTATGACTTGGCATGTTGTGCACCATTCCCAGACCTA
TGTTGCTCGCCTCGTTGTCTGTACCCTGACTCCCTTGCTAACACAGCCCATACTCCATCT
CTCCCGTTCTCACAACGTCCGGCCCGTTCTCGGACGAGGAGTTTGCGCCGTCGCCGGACG
TGATCACCGCGCTGGCAGACATGTCCATCCTCGTGATTGGCGCTGGCGGTCTCGGCTGCG
AGATTCTCAAAAACCTCGCCCTCTCTGGGTTTAAAAAGATCCACGTGATCGACATGGACA
CCATCGACATCAGCAATCTGAACCGGCAGTTCCTGTTCCGGCCGTCGGACGTGGGCAAGC
CAAAGTCGGAGGTCGCCGCAGAGTTCATCAACCGCCGAGTCGCCGGCGTGCACGTGACGC
CGCACTTTGGCAAAATCCAGGACTTTGACAACGACTTCTACATGCAGTTCACCCTCGTTG
TCTGCGGCCTGGACTCCATCGAGGCGCGGCGCTGGATCAACGCCACGCTCGTGGGGCTGG
TGGGCGACTCTCCTGAGACCCTCAAGCCGCTGATCGACGGTGGTACCGAAGGCTTCAAGG
GCCAGTCGCGAGTCATTCTGCCCACCATCACCTCCTGCTACGAGTGCTCGCTGGACATGC
TGACGCCCCAAACCACGTTTCCCATGTGCACCATCGCAAACACCCCCAGGCTCCCGGAGC
ACTGCATCGAATGGGCCAGCGTGCTCGAGTGGCCTAAACACTTTGACCGCAAGGCCGACA
ACGATGACGTCGAGGACGTGACGTGGATCTTCGAGCAGGCGCGCGCGCGGGCGGAGCAAT
TTGGCATCGAAGGAGTCACCTACCAGCTCACCCAGGGCGTGATCAAAAACATCATTCCGG
CCATTGCATCCACCAACGCCATCATTGCGGCCTCCAGCTGCAACGAGGCGTTCAAGGTCG
CCACCACGTGCGTACCGTTCCTCAACAACTACATGATGTACTCGGGCAACAACTCCGTGT
ACACGTACACATTTCAGCACCAGAAGCGGCCCGATTGCCCGGTGTGTGGCGTGCAGGTGC
TGCGGCTGGCCGTGCCCAAGAGCACGACGCTGGAGAACCTCATCGAGCGCCTCAAGGAGA
ATCCCGCCACCAAGGTCAAGAACCCGTCGCTGCGAACGGCCTCCAAGAGTCTATACATGG
CGTCGCCCAAGGAGCTGGAGGAGATGACCAGGGGGAATCTCGTCAAGCTGGTTGGAGAGT
TGGTGGGTGAGGAAGAGGTGACGGTGACTGACGAGGCATTGCCGTTTAGCCTAAGGTTGG
TTGTGGATGTCGAATAAAGAGTTGGTGAGCAGCGCGAGCCGCTCAACTTTTTTAATGGGT
GTTGAGAAAGCATATTAGTACTGTCGTGCGAACGAAACACGAAATGAGCTGGAGGTGCTC
TGCGAGATGCCCGAGCTGTCGTCGGTAGTGGTGATATACAACCGTCAAATGCATTACCCC
CGTCGGTGGTGGCGATACGTCAGTTGTATCGCCAATTGACTCCGCCAACCGCATCACTTA
TTTAATAGGATCATCTTCCGTAGCAATGTGTGAACGCACTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04147g_CDS-001

Protein length: 434 aa.
Product: Protein that activates Rub1p (NEDD8) before neddylation, putative

>YALI0F04147g_CDS-001 MHELHDQIWTSLPNLFSTMTAVRNPYSISPVLTTSGPFSDEEFAPSPDVITALADMSILV
IGAGGLGCEILKNLALSGFKKIHVIDMDTIDISNLNRQFLFRPSDVGKPKSEVAAEFINR
RVAGVHVTPHFGKIQDFDNDFYMQFTLVVCGLDSIEARRWINATLVGLVGDSPETLKPLI
DGGTEGFKGQSRVILPTITSCYECSLDMLTPQTTFPMCTIANTPRLPEHCIEWASVLEWP
KHFDRKADNDDVEDVTWIFEQARARAEQFGIEGVTYQLTQGVIKNIIPAIASTNAIIAAS
SCNEAFKVATTCVPFLNNYMMYSGNNSVYTYTFQHQKRPDCPVCGVQVLRLAVPKSTTLE
NLIERLKENPATKVKNPSLRTASKSLYMASPKELEEMTRGNLVKLVGELVGEEEVTVTDE
ALPFSLRLVVDVE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG