YALI0F04095g - IDP1

Overview

Description uniprot|Q6C2Y4 Yarrowia lipolytica YALI0F04095g IDP1 Isocitrate dehydrogenase, putative
Locus type CDS
Gene name IDP1
Locus tag YALI0F04095g

Location

Species Yarrowia lipolytica Positions 618362..620881
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2520 (nuc.)
Previous locus YALI0F04092t Next locus YALI0F04103g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04095g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04095gYALI0F04095g_mRNA-001YALI0F04095g_CDS-001

Nucleotide sequence

 

>YALI0F04095g
GCTAGGCGATATTCTTGTGTGACTACGAAAATTTCAGACCGTGAGTATGAATGCACAGCG
ACAGCGCAGCTGGAGCTGTGAGTGGATGAGAAGGGACTGTTTGTATCATGTTATTTGAAT
GCGATTCGAGTTCAATTTTACCCATGACAAGAAACACTGTTGTGGAGTGACATAGGATAG
GCAATGTTGTGGGGTGACACGAGTCGTGTGATGGGCACGACAGGGACAAAGTGGTGCGAT
TTGGCCTACATGATGGGCACGACTTTGGCAGTGTAATGGGCACGACTTTGTTATGTGATG
GGCACGACTTTGGCAGCGTGATGGGCACAACATTCGCAATGTCGTTACTTGGACAATTTC
CGACCGAATTTTGGCGAAAAAACGATATTTGCCGATGAAATTGGCCTACTGCGCCCCATT
TTCTTGATTATTTCTTCGCTGTCGTCATTGTTCGGGAGCTCCGCGTCTGTCCCGATGGAC
CTCTAGACTCCGGTTATTGGTGCATGTTAGGATGCAGCTCCGACCTGTAAGACGCACAGT
TTGACCGAGTGATCCGCAAGAAAAAATAAACCCGAAAAAGGGGCCTTTTTAGTGGCCCAG
GAGCGAGCACCAATTGGGGTCCAGTCAGCGTGGTTAATAATCCAGTTTCAATGGCATAAT
CTGTGCTGCTTCCCCGCAGATTAGTCACCATCTGATTAGCCAATGTCTGATTAGTCACCC
ACCGGCGTCTCTCGGAACTCCTCTCCCGTCACTGTGTCAATTCCTGCGTCTCATATTCAC
CGTGTCACACAGTGCATGTTGTGTCTCCCAATGTCCAGCAAAGACGTTGGAGCACCAAGT
TTGGTACACACTGATTTGTCATCTGTGGAGAGGTGCGGCGTGATTTGGTAGGTTTGAATG
ACGGCTCGTGTGGAGTATCGGCTCCGAGCCGGACCTGCTCGCTGTAGTCCTGCGTCAACC
CTACCCTTGCCTGCCTGCACTAGCCCTGCCCTAGCCCCGCCTGAAACCCTCGCCCCATCC
CAAAGCCTTAACCCTAACCCTACCACCGGCCGGTGCGATCGCGGCATTCCCAGCAAGGTT
AAGCTTTGGATGAAACTTTCTGGTGACTCTTCTTCGCACATATAACACCATGCAACCCCA
CGTTGAACCCCCACAGACCCTCCCTTGCCAGCCATGCTAACTCCAGCTACCACCCGGCTG
CTAGCCCTTTCTAAAACCATGTCCACCACCGCTACTCGAGGCCTGTCCACCAAGATCAAG
GTCAAGAACCCCATTGTCGAGCTCGATGGTGATGAGATGACCCGAATCATCTGGAAGTCC
ATCAAGGACAAGCTCATTCTGCCCTATCTCGACATTGATCTTAAGTACTACGATCTGGGC
ATCGAGTACCGAGACCAGACTAACGACCAGGTGACCATTGACGCCGCCGAGGCCATCAAG
AAGTACCAGGTCGGTGTCAAGTGCGCCACCATCACCCCCGACGAGGCCCGAGTCAAGGAG
TTTGGCCTCAAGAAGATGTGGCTGTCGCCCAACGGTACCATCCGAAACATTCTCGGCGGT
ACTGTTTTCCGAGAGCCCATTGTCATTCCCGCCGTCCCCCGGCTTGTGCCCGGATGGAAG
GAGCCTATCATCATTGGTCGACACGCCCACGGCGACCAGTACAAGGCCCAGGATGCCGTC
ATCCCCGGCGCCGGTGAGCTGACTCTTAACTTCAAGCCCGCTAACGGAGGCGACGAGCAG
GTCATCAAGGTGTACACCTACGACGCCCCTGGTGTCGCCATGGCCATGTACAACACTGAC
GAGTCCATCACCGGCTTTGCCTACTCTTCATTCAACCTGGCTCTGCAGAAGAAGCTGCCC
CTGTACATGTCTACCAAGAACACCATCCTTAAGAAGTACGACGGCCGATTCAAGGACATT
TTCCAGGAGATTTACGACAAGGAGTACAAGGATAAGTTTGATGCTGCCGGCATTTGGTAC
GAGCACCGACTCATTGATGACATGGTCGCCCAGATGATCAAGTCTAAGGGAGGCTTCATC
ATGGCCCTCAAGAACTACGACGGAGACGTGCAGTCCGACATTGTTGCCCAGGGCTTTGGC
TCTCTCGGTCTCATGACCTCTGTTCTCGTCACCCCCGACGGAAAGACCTTTGAGTCCGAG
GCCGCCCACGGCACCGTGACTCGACACTACCGACAGCACCAGCAGGGCAAGGAGACCTCT
ACCAACTCCATTGCCTCCATCTTCGCCTGGACCCGAGGCCTCATCCAGCGAGGCATTCTC
GACGAGACCCCTGAGGTGACCAAGTTTGCCGAGGCTCTCGAGAAGGCCACCGTCGACACT
GTTGACAAGGACGGCATTATGACCAAGGATCTGGCTCTGGCCGGTGGCAAGACCGACCGA
TCCTCGTATGTGCTGACCGAGGAGTTTATCGACGCTGTGGCCAACAGACTGAAGAAGGAC
CTGGCTTAGGGGAAAATGTTTATATTAATGATTTATGCGACACAACCGCACGATCGTAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04095g_CDS-001

Protein length: 417 aa.
Product: Isocitrate dehydrogenase, putative
Gene: IDP1

>YALI0F04095g_CDS-001 MSTTATRGLSTKIKVKNPIVELDGDEMTRIIWKSIKDKLILPYLDIDLKYYDLGIEYRDQ
TNDQVTIDAAEAIKKYQVGVKCATITPDEARVKEFGLKKMWLSPNGTIRNILGGTVFREP
IVIPAVPRLVPGWKEPIIIGRHAHGDQYKAQDAVIPGAGELTLNFKPANGGDEQVIKVYT
YDAPGVAMAMYNTDESITGFAYSSFNLALQKKLPLYMSTKNTILKKYDGRFKDIFQEIYD
KEYKDKFDAAGIWYEHRLIDDMVAQMIKSKGGFIMALKNYDGDVQSDIVAQGFGSLGLMT
SVLVTPDGKTFESEAAHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLIQRGILDETPEV
TKFAEALEKATVDTVDKDGIMTKDLALAGGKTDRSSYVLTEEFIDAVANRLKKDLA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG