YALI0F03641g

Overview

Description weakly similar to uniprot|Q08214 Saccharomyces cerevisiae YOL043C (ohnolog of YAL015C) NTG2 endonuclease III-like glycosylase 2
Locus type CDS
Locus tag YALI0F03641g

Location

Species Yarrowia lipolytica Positions 538695..540146
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1452 (nuc.)
Previous locus YALI0F03630g Next locus YALI0F03663g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03641g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03641gYALI0F03641g_mRNA-001YALI0F03641g_CDS-001

Nucleotide sequence

 

>YALI0F03641g
ATGAGACGCTCAGCTCGAGTGCAGGCGCTGGAAACCATCAAACGGCGCAAATTGAGCAAA
CTGCAGGCAGAAGGAAGTCATGTGACCTCTCACAACACTCCAGATCACGTGACGCAGCAC
CCTTCGCCGCCCACGCCGGCTGACAATGCGACAACGGTGGTTGGTCAGAATGGACAGAGC
GGCAGTAGCGACGGCAGCCACGCCCAGAGCACCCACGTGACCACCAGTGGGCCGAATGGA
CACGACCCTACTCCCGCTGGATCGAACGGACATCAAGTCACTACCAACCTCTCCGCCACC
GACGCTCTACCGCCACAGCAGTTTCGAACCACTCGGGCCCAGGCCAAGCTACTGAGTCAG
CAGAGAAACAACTTCAATGCGGTGCTTATTCCGCAGACGGATCTTAGACCTGTCAATTCT
CACATGACTCCCAAGCTGGATCAGTTCAAGTTCAGTCAGAAAGCCAAAGTTCAGTCAGAG
TCGGAGAATACAGTGAAGATTGAGGATGAGTTGGAGTCATATGACTTGTCACGTGACATC
AAAGCTGAGGAGAAGTCTGCGTACTTTATCAAAACAGAACCTGTCATCCCTCCCCTCATA
TCTGACATTGAAGAATGCCACACTTTTGCAGCGCCACAAGAATTCAACGTGCAAGACAAC
CCCGAGGTGCTTAGTCAGCCAGGTCCACGGGGCTGGAGCACCATTTACGCCCGTGTCAAG
AAAATGCGTGCTCTGGTCAACGCCCCTGTTGATACCATGGGTTGCGAGCGTCTTGTGCAA
GATGGAGTGCCTGCCAAAGTACAACGGTTCCAGTTACTAATCTCACTCATGTTGTCCTCG
CAGACCAAAGACGAGGTCACGTGCCAGGCCGTTTTGAACCTGCGCGAGTTTCTCAAGTCA
CGTGACCTGCTCTTGAGCGTGGACGGGATTCTGAGCATGTCTGTGGGTGAAATTGACGGT
TGTATCAGCAAGGTGGGGTTCCACAACCGCAAAGCTGATTATATAAGCCGTGCTACCGCG
TTGTTAGTCAAAGATTTCGGTGGAGATATCCCGCCCACCATCGCTGCTATGACGTCGTTA
CCTGGGGTGGGTCCCAAGATGGCTCATCTTTTGATGCACAGGGCCTGGGGTGTCAATGAG
GGGATTGGGGTGGATGTGCATGTTCACCGACTTGCCAATATGTGGGGGTGGGTCAAGGGC
AAGACTCCTGAGGAGTCTCGTGTTCAGTTGGAAAAGTGGTTGCCCCAGGAGCTGTGGGTC
GATATCAATCCAACTCTTGTCGGTTTTGGACAGACGGTTTGTCCTAGCAAGGGCAAGAAG
TGTGGGGTTTGTATTGTTGACAAGGGGTTGTGCAAGGCGAGACTTGTGAAGGGCCTGGAG
TGGAAGGAGGAAAAGTGGATGAAGGAGGGTTATCGGAAGATGATGGTCGAATATGAGGGA
GTTGAGCAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03641g_CDS-001

Protein length: 484 aa.
Product: Conserved hypothetical protein

>YALI0F03641g_CDS-001 MRRSARVQALETIKRRKLSKLQAEGSHVTSHNTPDHVTQHPSPPTPADNATTVVGQNGQS
GSSDGSHAQSTHVTTSGPNGHDPTPAGSNGHQVTTNLSATDALPPQQFRTTRAQAKLLSQ
QRNNFNAVLIPQTDLRPVNSHMTPKLDQFKFSQKAKVQSESENTVKIEDELESYDLSRDI
KAEEKSAYFIKTEPVIPPLISDIEECHTFAAPQEFNVQDNPEVLSQPGPRGWSTIYARVK
KMRALVNAPVDTMGCERLVQDGVPAKVQRFQLLISLMLSSQTKDEVTCQAVLNLREFLKS
RDLLLSVDGILSMSVGEIDGCISKVGFHNRKADYISRATALLVKDFGGDIPPTIAAMTSL
PGVGPKMAHLLMHRAWGVNEGIGVDVHVHRLANMWGWVKGKTPEESRVQLEKWLPQELWV
DINPTLVGFGQTVCPSKGKKCGVCIVDKGLCKARLVKGLEWKEEKWMKEGYRKMMVEYEG
VEQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG