YALI0F03597g

Overview

Description similar to uniprot|Q04179 Saccharomyces cerevisiae YDR400w URH1 uridine ribohydrolase
Locus type CDS
Locus tag YALI0F03597g

Location

Species Yarrowia lipolytica Positions 520935..522037
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1103 (nuc.)
Previous locus YALI0F03575g Next locus YALI0F03619g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03597g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03597gYALI0F03597g_mRNA-001YALI0F03597g_CDS-001

Nucleotide sequence

 

>YALI0F03597g
ATGATACCCATCTGGCTCGATTGCGATCCAGGCCACGATGATGCCGTCGCGATTCTTTTA
GCGGCGAAATTACCCGCCTTCAACTTGCTCGGAATATCGACCGTTTTCGGAAACGCGCCG
TTGGAAAAGACAACCGTCAACGCCATGGCCGTGCTGAAAGCAATCGGACAAGATTCGGAA
ATCAAAGTGTATCCGGGCGCCGAGAGAATTCAGTCACGGGGTGGTGGCGGCGATGGTGGG
TCACATGACCAATCCAACCAGTCGCACAGCCCTTCGTCGTGTTCCCGTGGCCATTACGAA
ACTGCTCCCTCCACATTTGCTCCTTCGATTCATGGTGAATCAGGTTTGGATGGAACGTCT
CTGTTGCCGGAAATCACGTGCACAATCGAACCTCATGTTGATTCCACTCTCGTGGCCATG
GCAAACGCCATCCGAAACAACCCCGGCACGTGTCTTGTTGCTACTGGTTCACTTACCAAC
GTTTCAGCGCTATTTGACCGCTTTCCAGATGTCAAAAATCTTGTGGAAACAGTTTCCATT
ATGGGAGGAGGATTTGGAATGGGCAATTGGACGCCCTATGCGGAATTCAACATCTGGTGC
GACGCCGAGTCAGCTAGCCAGGTGCTCGGCGACCCGATCGTCGCTGCGAAGGTTGTGCTC
TGTCCACTGAACGTGACTCACACGGCCATTGCAACCGAAGAGGTGCTTAGTCAGATCAAG
AGTGTCGGCGGTAACGTGAGCCAGATGTTTTTCGAACTCATGACCTTTTTCAAGGAGACA
TACGAGTCCGAGTTTGGTTTCAAGGACGGTCCTCCTGTTCACGATCCTCTTTCTGTGGCT
GTTTTACTCAACGGGATTGTTACGAAGGAGAGAAGAGTGACAGTGGATGTCACTGTGGGG
GGAGAACAGAGAGGAATGTTGACGGAGCAAGTGGGGGGTCACTTGACGGTGGTTGAGGAG
GTGGATCTGAACAAGTTTTGGGCTTTAGTGGTGACTTGTTTGGAGGCATGCAAGTGAGTC
TGTGTTGAACTGAGCGACTGAGGATCAAGTATCATGAGCCAACAGAGCTGATGTATAGTT
GTAATATGATTTGACTTACCTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03597g_CDS-001

Protein length: 339 aa.
Product: Uridine nucleosidase (uridine-cytidine N- ribohydrolase), putative

>YALI0F03597g_CDS-001 MIPIWLDCDPGHDDAVAILLAAKLPAFNLLGISTVFGNAPLEKTTVNAMAVLKAIGQDSE
IKVYPGAERIQSRGGGGDGGSHDQSNQSHSPSSCSRGHYETAPSTFAPSIHGESGLDGTS
LLPEITCTIEPHVDSTLVAMANAIRNNPGTCLVATGSLTNVSALFDRFPDVKNLVETVSI
MGGGFGMGNWTPYAEFNIWCDAESASQVLGDPIVAAKVVLCPLNVTHTAIATEEVLSQIK
SVGGNVSQMFFELMTFFKETYESEFGFKDGPPVHDPLSVAVLLNGIVTKERRVTVDVTVG
GEQRGMLTEQVGGHLTVVEEVDLNKFWALVVTCLEACK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG