YALI0F03223g

Overview

Description similar to uniprot|Q00362 Saccharomyces cerevisiae YGL190c CDC55 ser/thr phosphatase 2A regulatory subunit B, pseudogene
Locus type CDS
Locus tag YALI0F03223g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 448091..449723
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1633 (nuc.)
Previous locus YALI0F03201g Next locus YALI0F03245t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03223g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03223gYALI0F03223g_mRNA-001YALI0F03223g_CDS-001

Nucleotide sequence

 

>YALI0F03223g
ATGGACGAACAATGGAAATTTTCCCAATGCTTCGGCGACAAGGGCGACATTGAAAACATC
ACGGACGCGGACGTGATTTCGACCGTGGAGTTTGACCACACCGGCAACTACCTGGCCACC
GGCGACAAGGGAGGCCGAGTAGTGTTGTTTGAGCGGAACGAAAACAAGAAGGGATGCGAG
TACCGGTTCTACACCGAGTTCCAGAGCCACGACGCCGAGTTTGACTATCTCAAGTCGCTG
GAGATTGAGGAGAAGATCAACAAGATCAAGTGGTGCAAACGCCAGAACCAGGCCCACTTC
TTGCTTTCCACCAACGATAAGACCATTAAGCTGTGGAAGGTGTACGAGAAGTCTTTGCGG
GTGGTTGCCGAGAATAACCTCAGCGATTCGAACAACGCCGGCGCTGCTTCTGCAGCCGCC
CCCGGCACCTCCACAAAGCCCAACCAGCTCACCATGGACACGCTTCGACTGCCCCGAATG
ACGCTCCATGACACGATTGTGGCGGCCTCACCCCGACGCATCTACGCCAACGCCCACACC
TACCACATCAACTCGATTTCGGTCAACTCGGACGGCGAAACGTACATTTCGGCCGACGAC
CTGCGGATAAACTTGTGGAACCTCGGCATTGCGGACCAGTCGTTCAACATTGTGGACATC
AAGCCCCGCCAACATGGAGGAGCTGACGGAGGTGATCACCGCAGCAGACTTCCACCCGCA
GAGTTGCAACCTGTTCATGTACTCGTCTTCCAAGGGTACTATCAAGCTGGCCGACATGCG
AGACAATGCTCTGTGTGACGGCCACGCCAAGCAATACGAGGAGTGGATGGACCCGGCACA
GCACTCCTTCTTCACTGAAATCACGTCGTCGATTTCGGACGTCCGTTTCTCCAACGATGG
ACGATATATTCTCTCCCGAGACTACCTCACAGTCAAAATCTGGGATGTGAAGATGGAGCG
AGAGCCCGTGCGGACCATCAACATCCATGAGCAGCTGCGTGACAAGCTGTGTGACACCTA
CGAGAACGACGCCATCTTCGACAAGTTTGAGGTTGTCTTTTCCGGCGACGGCAAGTCAGT
GTCCACCGGATCGTACAACAACAACTTTATGATCTATCCGGATGCCGTCAACCCTGCCAC
ACCCGAAGATGCCGAGATCATTCTGCAGGCCGACAAGTCCGCCTTCAAGCAGAAGAAGTT
TGGCGTTCCCAGCGCCATGGGCGGTATTCTCAAGGGCGGCAACGGCGCCAACTCACCCAA
TGGCCGAAAGCGAGGCCAGTCTCCAGGAATGAACATGGTCAAGCGGGACATGGACTTTGA
CACGATTGATTTCAAGAAGAACATCCTGCATCTCAGCTGGCATCCCCATGAGAACTCGAT
TGCTATTGCGGCTACAAATAACCTGTTTGTGTTTAGCACTTTGTAACGAACTTAGGAGCA
ACGAAGAACATGTGGCGCGACGCGACCATGTGAGTAGCGACTATGGGAGAAGGAGCGGAC
ACAGACGGATCGAGCACTAGATCGACTGAAAGGGGCATATGGGATACGGCTGGGGACACA
ATCTCGCAGCTCGTATGTGTTTTGGTATAGGTTGGAGGGATATATAATGAGTAATGATTA
TAGAAAGGACGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03223g_CDS-001

Protein length: 475 aa.
Product: Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), putative

>YALI0F03223g_CDS-001 MDEQWKFSQCFGDKGDIENITDADVISTVEFDHTGNYLATGDKGGRVVLFERNENKKGCE
YRFYTEFQSHDAEFDYLKSLEIEEKINKIKWCKRQNQAHFLLSTNDKTIKLWKVYEKSLR
VVAENNLSDSNNAGAASAAAPGTSTKPNQLTMDTLRLPRMTLHDTIVAASPRRIYANAHT
YHINSISVNSDGETYISADDLRINLWNLGIADQSFNIVDIKPANMEELTEVITAADFHPQ
SCNLFMYSSSKGTIKLADMRDNALCDGHAKQYEEWMDPAQHSFFTEITSSISDVRFSNDG
RYILSRDYLTVKIWDVKMEREPVRTINIHEQLRDKLCDTYENDAIFDKFEVVFSGDGKSV
STGSYNNNFMIYPDAVNPATPEDAEIILQADKSAFKQKKFGVPSAMGGILKGGNGANSPN
GRKRGQSPGMNMVKRDMDFDTIDFKKNILHLSWHPHENSIAIAATNNLFVFSTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG