YALI0F02145g

Overview

Description weakly similar to uniprot|P39013 Saccharomyces cerevisiae YNL084c END3 required for endocytosis and cytoskeletal organization
Locus type CDS
Locus tag YALI0F02145g

Location

Species Yarrowia lipolytica Positions 337696..338972
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1277 (nuc.)
Previous locus YALI0F02123g Next locus YALI0F02167g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F02145g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F02145gYALI0F02145g_mRNA-001YALI0F02145g_CDS-001

Nucleotide sequence

 

>YALI0F02145g
ATGAGTGCTCAAGGTAAGCTGGAGGAGTGGGAAATCAACAAGTACTGGGACATTTTCAGC
GGGCTCAAACCCGTCAACAATGTGCTCACCGGCGACCAGGTTTCCCCCGTGCTCAAAAAC
TCCAATCTGTCGGAGGACAAGTTGGCCAAGATTTGGGATCTGGCCGACGTGGACAGTGAC
GGCTGTCTCGACTTTGAGGAGTTCTGTATTACCATGCGACTCATCTTCGACCTTCTCAAC
AACAACATCAACGACGTGCCCTCCACGCTACCCCAATGGCTGGTCCCACAGTCCAAGGCC
CACTTAATAGAAGCCAACAAAGCCATCAGCCAGCCCCACTCCAAGCTGGATGATTCCGAC
GACGAGGATCTCGAGAACCTCGGTCTCTCTACAGATTTCGACTGGTACATTTCGCCTGCC
GATCGAGATTCCTACTCGGCCATCTTCACAGCCAATTGTGACCGTCATGGCCGGGTCTCC
TATGATGCTCTGACGGAGCTCTACCAGACTCTGAGCCGGGTGCCCGAAGGCGACATTGCC
ATGGCCTGGAACCTGGTCAACCCCAAGTCCGACGAGCGGATCGAGAAGGAGCAGTGTCTG
GTGTTTCTGCACATGCTTAACTATCGAGAAAAGGGAGTGCGTATCCCCCGAGGAGTGCCT
GCGTCGCTGCGAGCCACCTTTGAGAAGGCCACCCCTGAGTTCAGCATAAACTCGAGCCAG
GCCGAGCTCAAGCCCCAGAAGAGCAACGCCCCTGCCTCCAAGAAGGAGGCGTTTGCCAAC
GGCTACCTGCAGAAGCTGGGTATTGGAGGAAATTCGTACTCAACATCGGGCACGGACTTT
TCGGCCACCAAGGACACCGACTGGGAGGAGGTGCGGCTAAAGCGGGAACTGACGGATCTG
GAGAACCTGGTGGAAAAGGCTGAACGTGCGGCCGCCGACTCAAAACAGCACGGCAACTCG
TACTCCACGTCGCACACTGCATTAATCAAACGAGAGCTGGAGCAATTGCTTGATTACAAG
GAGGAACAGCTTCGGAAGGCTAAGAGCGGCGCTCCCGCGTCGGTGGGGGAGACCAACCTC
AAGGAAAGTGAAGAGGAGGTCAATCTGCTGGAGATGCAGGTGAACGAGCTGGAGGTTCAC
CAGCAGAGAAAGCAGCAGGAATTGGACCAGCTGGAGGCAGAGTTGGCTTCTCTGAGAAAG
TAAGTAGAGCACCATTTTCTAGTAGAAGGTGCACAACTGAGCTGTATATTTAATGACAAA
TTTGACGAGCAATGAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F02145g_CDS-001

Protein length: 401 aa.
Product: Conserved hypothetical protein

>YALI0F02145g_CDS-001 MSAQGKLEEWEINKYWDIFSGLKPVNNVLTGDQVSPVLKNSNLSEDKLAKIWDLADVDSD
GCLDFEEFCITMRLIFDLLNNNINDVPSTLPQWLVPQSKAHLIEANKAISQPHSKLDDSD
DEDLENLGLSTDFDWYISPADRDSYSAIFTANCDRHGRVSYDALTELYQTLSRVPEGDIA
MAWNLVNPKSDERIEKEQCLVFLHMLNYREKGVRIPRGVPASLRATFEKATPEFSINSSQ
AELKPQKSNAPASKKEAFANGYLQKLGIGGNSYSTSGTDFSATKDTDWEEVRLKRELTDL
ENLVEKAERAAADSKQHGNSYSTSHTALIKRELEQLLDYKEEQLRKAKSGAPASVGETNL
KESEEEVNLLEMQVNELEVHQQRKQQELDQLEAELASLRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG