YALI0F01947g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F01947g

Location

Species Yarrowia lipolytica Positions 306031..307561
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1531 (nuc.)
Previous locus YALI0F01925g Next locus YALI0F01969g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F01947g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F01947gYALI0F01947g_mRNA-001YALI0F01947g_CDS-001

Nucleotide sequence

 

>YALI0F01947g
ATGTCTTACCAATCGACCAAGGCCCCACCGCCTTTTCGACGGACCCCTACAAAGTCGCCG
GTACGATCCTCGTTTGAGTCAGTGTCTTCGAATACCCCACTGGACTTTTCTCTGCCGTCA
TACCACTCGCCTTCGGAGAAGCTCCAACCACCACAGAAGGGATCCAAGAGCAAACGATAT
GTCCTTGTTCTGGCCACAGCAGCACTATGTTGCTTCATGTACATACTGGCCATGTCTGCG
CCTGAAAAGACTGGAAGTGATGCTCTGGTGGCCCTCAAGAACAAGGTCTCGCAGTCAACA
GAGACTCTCAAGCAGCTTATCCCCGCCCAGCCGTTCGTATGGTCCGAACCCACACCCAAC
TTCCACAGCTACGCCATCGCCTACCTGCCACTCAACAAGAACAGCAAGTGCCGCCGACAG
AGCCAGATCACTGCCGACTTTGCATCTCTGGAGGCTTCAGGCCGCGTAGAGGCCATCCGG
CTCTTTTCTACCGACTGCAAGGTCATTCCGGCCTATCTGGACTACCTCAAGAATAGAGAC
TCGAAGAAGCGAAGCGTGGACTCCGCTCTCAAGCTAGTACTTGGAATCGAGCCCAGTGCA
CTGGAAACCACTTCGGATCTGGACTCCGAGGCCACGTCTCTCGAGCTGCTGACCAGATCT
GTCGACGCCCAGCTCATGGACATCATCGACTCTCTGGACGAGTCTTCTTCTGCCACCGAG
GCCTTTCTTCGACAGCTGGATCTGATCGTGTTGGGTTCCGAGGGCCTGGCCAACCAAAAT
TACCATCCCAAGGAGCTCGTCGAGGTCCTGGCTCACATCCGACAGCGTCTCGACACTCTG
TCTTCCGACATTCGAATCCCAGTCACCACCTCCGAGCCTCTGGGCATCTGGGACGTGCTG
ACACCCAAGGAGCGACGAGACAACGTCCAGGAAATGCTTGCACGACAGGACGGAGTGCAC
TCTGTCACTCCCGACGACATTGAAGGCCCCACGGGTCTGTTTTGCGACTCCGTCGATGTG
ATTGGTTTGTCTGTCTCTCCCTTCAACAACCCTACTGTCGACGCTGCCCATGCCGGTGCC
GAGGTCGAGGAGTCTGCCTACCTTGCCTCGCTTCTGTGTAACAAGCCTGTGCTCGCCCTG
GAGGTGGGATGGCCCTCGGCTGGTTCGGATAACGGCAACGCCAAGACCGGCAAGGACGAA
CAGCTACAAGCCGTGTCTAGTATCACTGCTGCTGTTGAGCGAATCTCCGGCAAGCCCCTG
AGATCCGTTTTGTATCAGTACTTTGACGACGAGTGGCTGTCCGCAGACGAGGACTTTGCC
CGCCATTTCGGCCTGAAGCGGTTGTTCTGAACGACAAAACAGTAACTAACTTATAATGAC
ATTATGGGAACGATTGACCCAAGGTCAGCAATGAACCCAATGAACCAATTTTGTCTACCT
GGTAGATTTGTCTACCTGGTAGATGTGTCTACTACAGGCAATGTAGACAGACCTTCATAG
AGAGTACAACAGTGCACACTGCAACTATCTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F01947g_CDS-001

Protein length: 450 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F01947g_CDS-001 MSYQSTKAPPPFRRTPTKSPVRSSFESVSSNTPLDFSLPSYHSPSEKLQPPQKGSKSKRY
VLVLATAALCCFMYILAMSAPEKTGSDALVALKNKVSQSTETLKQLIPAQPFVWSEPTPN
FHSYAIAYLPLNKNSKCRRQSQITADFASLEASGRVEAIRLFSTDCKVIPAYLDYLKNRD
SKKRSVDSALKLVLGIEPSALETTSDLDSEATSLELLTRSVDAQLMDIIDSLDESSSATE
AFLRQLDLIVLGSEGLANQNYHPKELVEVLAHIRQRLDTLSSDIRIPVTTSEPLGIWDVL
TPKERRDNVQEMLARQDGVHSVTPDDIEGPTGLFCDSVDVIGLSVSPFNNPTVDAAHAGA
EVEESAYLASLLCNKPVLALEVGWPSAGSDNGNAKTGKDEQLQAVSSITAAVERISGKPL
RSVLYQYFDDEWLSADEDFARHFGLKRLF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG