YALI0E34925g

Overview

Description some similarities with uniprot|Q9C2Q2 Neurospora crassa Related to transcription activator a
Locus type CDS
Locus tag YALI0E34925g

Location

Species Yarrowia lipolytica Positions 4167529..4169083
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1555 (nuc.)
Previous locus YALI0E34903g Next locus YALI0E34947g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34925g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34925gYALI0E34925g_mRNA-001YALI0E34925g_CDS-001

Nucleotide sequence

 

>YALI0E34925g
CCAGGTCCCTTCTATGTCAGGCTGCTCGAAGACAATCAAAAGCTCACACCAATGTTTGGC
GCCATCAACCTCAAGATCAAGCAGAATAACAACTCACAGCCAAGGGCATGCGACAGTTGC
AGAGTTCGCAAGATCAAAGTAAGTACCAATCACTCACCAATTGCCCCACAAGTTTGCTCC
ACTAACACCAGTGTCCCAATATCGAACAAGGCATTCGACCAAACAATGGCATCTTCAAGC
CCTGTGACAAGTGTGTTCAGGCCTCTCTGTGCTGCACATACAACCAAATGTCCAAGAAAA
AGGGTCCCAAGATTTCCACCAAAAAGCGCAAGCTGGCTCTGGACCAGCCCTGGGAGATCA
CCGAGGAGATTGTATTCCAGCACTTTGAGAACGAAGAAGAGTCCCATCTCTGCTTTGTCA
AGAAAGACGAACCCAACGAGGTGTTCAGCAGTCCCGAAACCTCCAATTGCAGCATTATCG
ACGAAGACCTAGGCTCCTATTCCTTCGGAAACACAACTCCCTGGGGAGGCTCGTCACCAA
TGACCGCCCCTCCCATGTCCCCCATACTTATCAATGAACTGGTGTATTACTTCCGACACG
TTTACACAGAGCTGCCGATTGTGGACCTTGGGGACGACAACTACTGCCTACTGGAGGGCC
TTCGACTCGCTAACATGACCCACAAGTTCAAGACTGCACGTGATGCCGTCAGTAAAGACG
CTCTGGTGTCTCAAATCCAGCAGGTGCACATGCAGAGAGTCTCTTCTACTAACGACAATG
TCACCATAGACTCTGTCTGTGATTCTATCTTTCTGCACATGGCCATGGCCGCCCTCGACA
ACCGCAACAAGGCCATGGTCTACCTCAGCGAGGCCCACACATACTACCAGCTTGTGGTGT
CTTGCCACGAAAATAACTCTCGCAACGCCCCTCGTCGCAAGCGAGTCAACTGTGTACTAA
CCAACCTGCGACACGAAGCAGGTGCTCACCATCTCTCCAGCGAACCACCCAACTACATTC
TGCTGGAGCTCATGTCCCCACCTTACATTGGACATCTGGCCCACATCTGTCTCGACTCCT
ACAACTACCAGGTCACTTCTCTTCTTTTATGGCATACTTCGATTACTGTGGGTCAGGAAC
ACAAGGCCCCGGCCACGTCGGAGTGTGTCACCATGGAGCCACAACAGCGAGCTGCAATGG
ACTGTCACGTTGCCAAAATCGCCATCCAGCAGTATTTGCAGTTTCTAAGGAAGCCCGGGT
CGTCTCAACAGGCGTTGATAAAGTTCGGCGAACTACTCAACAACCGCCTCGGCTTGCTCT
CTTCTTCTCAGCTCCATGTCTGCGGAACCTCGACTCTCAAGACCATTGTCGACATTCTCA
AGCAGTTCCCCGCTCTGCAGCAACTGGCGGGCCTTCTACAAAACCACATTGACAAGTGCG
AAATGTGGGACTTTAGCATTGACTGGCTGGACCTTCCCCAGTGGGAAACTCAGATGCCGG
CTCTCAGCACTTGATAGGCGAACCAATTCTATAATTTATACACGCAATAATTGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34925g_CDS-001

Protein length: 470 aa.
Product: Conserved hypothetical protein

>YALI0E34925g_CDS-001 MFGAINLKIKQNNNSQPRACDSCRVRKIKCPNIEQGIRPNNGIFKPCDKCVQASLCCTYN
QMSKKKGPKISTKKRKLALDQPWEITEEIVFQHFENEEESHLCFVKKDEPNEVFSSPETS
NCSIIDEDLGSYSFGNTTPWGGSSPMTAPPMSPILINELVYYFRHVYTELPIVDLGDDNY
CLLEGLRLANMTHKFKTARDAVSKDALVSQIQQVHMQRVSSTNDNVTIDSVCDSIFLHMA
MAALDNRNKAMVYLSEAHTYYQLVVSCHENNSRNAPRRKRVNCVLTNLRHEAGAHHLSSE
PPNYILLELMSPPYIGHLAHICLDSYNYQVTSLLLWHTSITVGQEHKAPATSECVTMEPQ
QRAAMDCHVAKIAIQQYLQFLRKPGSSQQALIKFGELLNNRLGLLSSSQLHVCGTSTLKT
IVDILKQFPALQQLAGLLQNHIDKCEMWDFSIDWLDLPQWETQMPALST*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG