YALI0E34771g

Overview

Description weakly similar to uniprot|P22580 Saccharomyces cerevisiae YDR242w AMD2 amidase
Locus type CDS
Locus tag YALI0E34771g

Location

Species Yarrowia lipolytica Positions 4143826..4145529
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1704 (nuc.)
Previous locus YALI0E34749g Next locus YALI0E34793g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34771g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34771gYALI0E34771g_mRNA-001YALI0E34771g_CDS-001

Nucleotide sequence

 

>YALI0E34771g
ATGACCGACTACGAGGCCCGAAAAACCTACATTGCCCGACGAGACGAGTCAATGCGGCTG
GTTGACCAGGTCTTCGACAGCCCATTCAAAGTCGCCGATCTCAAGGTCCCCGACGAGATT
CCGCTTGATGCTAAACCTCTCTTCCTGTCGCTGGTAAGCGATGATGACCGCAAAATCCTT
CAGATCCCACCCATGGAGCTGTTGGAGAAACTCAAGAGTGGCACTCTCAAGGCAGTCCCA
GTAGCAGGCGTCTTTTGCAGAGCCGCAGTCGTGGCCCAGAAACTCGTCAACTGCTGCACC
GAGTTCCTCCCCGACCTCGCACTCATGTACGCTAAAAAAGCCGATGAGTACATGGAGAAG
AATGGCAAACCTATGGGTCCCTTCCACGGTTTCCCCTTGTCCATCAAAGAGCTGTATGCC
CTGGAGGGCAGGGCTGCTCACTGGGAGAACCCCGACCTCATCAACAACATGCAGACCGAC
AACGCAGTACTGGTCAACGGTCTTCTCGAGCTGGGATGTGTGCCATTTTGCAGAACCACC
GCGCCTCAGTTTCTCATGTCTATCGAGTCCTTCTCTCCCATGCACGGACTTACTACAAAC
CCTCACAACACCAGCTTGTCCTCTGGAGGCTCTTCCGCTGGCGAGGGTGCCATGATTGCC
ATTGGAGCGTCTCATCTCGGTCTGGGGTCCGACATTGGAGGCTCCATTCGAGTGCCTGCG
GCCTGCTGTGGCATCTATGGCTACAGACCTACAAACGGACGAGTGCCTATTACTGGTGCA
GACTCCCTGACACCAGGTTACAACGCCATTGCCGGTGTCGTAGGTCCCATGGCATCCTCG
GCAGATCTTATCACTCTCTTTATGGAGTCTATCGAGAGCCTGGAGCTCTGGAAACGAGAT
ACCTTTGCCGAGCGGTCTGCCTGGGTGCCTGTCAACCCCAAGGAGGTCACTGTAGGCTAT
CTTCTCGACGATGGACACGTCAAGCCCCACCCCCCAGTTGAGAGAGCCATTAAGGAGTTC
ATTTCCAAAATGGAAAAGGCCCAGCTTCCGTTCACTGTCAAGTTCAAGCCCTTCACCCCC
ATGCAACACGAAGAGGCCTGGAAGATAATCACAGGTCTTTACTTCCCCGACGGTGGTCAG
TTTTTAAAAGACGCTCTCACCAATTCGGGCGAGAAGGCCACTGACCAGACCAAGATGATC
GCCCTCGAAAACCCCAACTGTGTTGAGCACTCGGTGAAGTCTCTGTACGCCGCGCAGGAC
GTCAGAAACAAATACAAGACAGCATACCAGAAGCACTGGAAGGACCAGGGAGTGGACGTG
GTGATCATGCCCACAGTTCCATCAGCTGCCATTGTGCCAAACACAACAAAGTACTGGGGA
TACACTTGTGTGTGGAATTTGCTTGACTACCCTGCTACAATCATGCCCATTGGTAAGGTG
CAGGAGAGTGATAAGAAGGACGAGAGTTATACTCCCCGTAACGATCTCGACAAGGCCCAC
CAGGATCTGTATTCTCCAGAGACTTACGCTAATGCTCCTGTGGGTCTCCAGATCGTCACT
CCTCGATGGAATGATGAGTTGGCTCTCAAGATGATGGAGGTGTTCTCTCATGCTATGTGA
ACACGAAAAAATGTGTGTATTTATCAACGATCTTTTCGTCTCGTACTCCATATAGTTTAA
CGTCCAATCATCTATTGAATTCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34771g_CDS-001

Protein length: 540 aa.
Product: Conserved hypothetical protein

>YALI0E34771g_CDS-001 MTDYEARKTYIARRDESMRLVDQVFDSPFKVADLKVPDEIPLDAKPLFLSLVSDDDRKIL
QIPPMELLEKLKSGTLKAVPVAGVFCRAAVVAQKLVNCCTEFLPDLALMYAKKADEYMEK
NGKPMGPFHGFPLSIKELYALEGRAAHWENPDLINNMQTDNAVLVNGLLELGCVPFCRTT
APQFLMSIESFSPMHGLTTNPHNTSLSSGGSSAGEGAMIAIGASHLGLGSDIGGSIRVPA
ACCGIYGYRPTNGRVPITGADSLTPGYNAIAGVVGPMASSADLITLFMESIESLELWKRD
TFAERSAWVPVNPKEVTVGYLLDDGHVKPHPPVERAIKEFISKMEKAQLPFTVKFKPFTP
MQHEEAWKIITGLYFPDGGQFLKDALTNSGEKATDQTKMIALENPNCVEHSVKSLYAAQD
VRNKYKTAYQKHWKDQGVDVVIMPTVPSAAIVPNTTKYWGYTCVWNLLDYPATIMPIGKV
QESDKKDESYTPRNDLDKAHQDLYSPETYANAPVGLQIVTPRWNDELALKMMEVFSHAM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG