YALI0E34687g

Overview

Description similar to uniprot|P53250 Saccharomyces cerevisiae YGR080w TWF1 twinfilin, an actin monomer sequestering protein
Locus type CDS
Locus tag YALI0E34687g

Location

Species Yarrowia lipolytica Positions 4133671..4134846
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1176 (nuc.)
Previous locus YALI0E34672g Next locus YALI0E34727g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34687g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34687gYALI0E34687g_mRNA-001YALI0E34687g_CDS-001

Nucleotide sequence

 

>YALI0E34687g
ATGAATCAAAGTGGAATTGAAGGTGAGTACAAGACCGGTGAAGAGGAGTAGGAGCATCAA
TCGTGACACACAGTTCAACAGGAGGACCCCAGTGTCTCTACAGCAGCCTCACCATCGACC
AAAACTGCCAGTACGCCCCTATAGGTAAACCGCTCTGCCAGCACACGTCAATTGAGCTAA
CACAGCAACACCCGGACTGGCCCAGAAACTACACTCGTTCGGCCGAGGACTGATCGTCAA
GATACAGGACGAAAAGCTCGAACACACACACGAGATCGACGACTCGCACACATTCGAAAG
CGGCTTCGAGGAGGCTCGAGCCAAGCTGTCCGACAGAGAAGCAGCATACCTGCTGTACCG
AAACAACGACGAGATTCTGGTCATCACCTACGTGCCTGATGACGCCAAGGTGCGCCAGAA
AATGCTGTACGCCTCGTCCAAGCAGGCTCTTACCCGAGAACTCGGTGCTTCCAATCCGGT
TGATCTGTTCGTGACCGAGCTCGAAGACATCTCTGAGAAGGGCTACAAGTCGCACGTTCG
ACACGCCAACCTGGGAGCTCCCCTGACCCGAGAGGAGGAGAGCCTCAAGTTCGTCAAGGA
GAACGAGGCCGGCGTTGCCCAGAGCCACTCCGTCAACATCACACACTCCAAGGGTATCGA
GATGAAGCATGCGGCCGACTTTGACGACAAGCTCGCTTCTTTCGAGTCTGCCTCCGAGGG
CGCCATTCTGCCCTTCACCATCGACGTGAGCAACGAGGAGGTCATTCCTGGTTCCATCTC
GTCTGTCTCTGACTGGAGAGAGATCAAGACTCCCGAAAGCCACCCTCAGTACACGCTGTA
CAAGTCTCCCTCCGGCGTGGTGTTCATCTACACATGTCCCTCGGGCTCCAAGATCAAGGA
GCGAATGCTGTATGCTGCGTCACGACGGGTTCTTCTCAGCAACATTGAGAAGAACATCAC
CGTGGCCAAGACAGTCGACGTTGGGGACGAAGATCTTGACCTTGATGAGGTTGTAGCCGA
GAAGAAGGAGACAGCCAAGGGCGGTCTTCGATTCAAGCGTCCCACCCGACCCGGTAGATA
ACTGTAATTATTAACGATTTATGCCAAAAAAATATGCCAAACAGACAGGATTTGTTGTAA
TTTCCTCAGATATATACAACATGCAACATTGTCCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34687g_CDS-001

Protein length: 306 aa.
Product: Twinfilin, putative

>YALI0E34687g_CDS-001 MNQSGIEATPGLAQKLHSFGRGLIVKIQDEKLEHTHEIDDSHTFESGFEEARAKLSDREA
AYLLYRNNDEILVITYVPDDAKVRQKMLYASSKQALTRELGASNPVDLFVTELEDISEKG
YKSHVRHANLGAPLTREEESLKFVKENEAGVAQSHSVNITHSKGIEMKHAADFDDKLASF
ESASEGAILPFTIDVSNEEVIPGSISSVSDWREIKTPESHPQYTLYKSPSGVVFIYTCPS
GSKIKERMLYAASRRVLLSNIEKNITVAKTVDVGDEDLDLDEVVAEKKETAKGGLRFKRP
TRPGR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG