YALI0E34551g

Overview

Description similar to uniprot|Q9P424 Ajellomyces capsulata Putative calcium transporting ATPase
Locus type CDS
Locus tag YALI0E34551g

Location

Species Yarrowia lipolytica Positions 4108360..4112519
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 4160 (nuc.)
Previous locus YALI0E34540g Next locus YALI0E34573g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34551g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34551gYALI0E34551g_mRNA-001YALI0E34551g_CDS-001

Nucleotide sequence

 

>YALI0E34551g
CAGACCATCACAAGACGACTGAACGGTGAGTACTAAAAGAGCATCTTGCGCCCCAAATAT
CCACTATCTCACACAGATGTCGTATCAGAACTTCAACCTGCTCGATGTTGACGACGACGA
CTTCGAGCCCAAAGGCCCTGGGGGCTCACAACACCAACACCAACCGGGTCCGTCTTCCAG
CAGACCTACTCTGACGCCGTTTGACAGCATACAAGATGGCGACACATTTATCGAGGCCGA
CGACTACGATGCATACGGCGACAGTGGCAAGCGACCGATGGAAAAGCCGCCACAGCGAGG
GAACAGCATGTATGGAAACATGAAGGCGCGTCTGGGGTTTGGAGACCCGGACTACTCGGA
GATGGACCTGCCATTGAACGAACGCACTCCCTACGAGAGAGATGCTGAGTCGATCAATGC
CGGAATCTCCGATGCTAGACCTTCGGGAACAATGAACCGAACGAAAATCAGATCAAAGGT
CAAAAAAAGCACCATGAGTATGCCCGATTTCGACATTCGACGCATGTGGAACCGGATGCG
AGGCCACCAGGAGGAGCGGGGCCCCGATGGACCGCGAGTTGTGCATCTCAATGACCCGGA
CGCCAACTCTGCGCTCAGATATGGTGATAACCACATTTCCACCACAAAGTACAACCTGTT
TACGTTCCTGCCAAAGTTCTTCTTTGAGCAGTTCTCCAAGTATGCCAACCTGTTCTTTCT
GGCCACCGCGTGCATCCAGCAGGTGCCCAACGTATCGCCTACAAACAGATGGACGACGAT
TCTGACGCTGCTGGTGGTGCTGATTGTGTCGGCTGTCAAGGAGCTGGTGGAGGACTTTAA
GCGAGCGGCTGCCGACAAGGAGCTCAACTCATCAACGGCCTACGTGCTAGAAGGATCGTC
GTTTGTGGCGAGGAAGTGGATCGATGTTGCAGTGGGAGACATTGTGCGGGTGGACTCTGA
AGAGCCCATCCCTGCCGATGTGGTCCTCCTGGCATCTTCCGAACCCGAGGGTCTGTGTTA
CATTGAGACTGCCAACCTGGACGGAGAGACCAACCTGAAGATCAAACAGGCTCACGGAGA
TACGGCTCCGTACGTGTCTCCCAGTGAGCTTTCTCGAGTCAGAGGCCAGCTAGATTCCGA
GCTACCCAACTCCTCTCTTTACACTTATGAGGCGACCCTGAAGATTGACGGACGGCCCCC
GATTCCCATGTCTCCCGAGCAGATGTTGCTTCGAGGAGCCACTCTGCGAAACACCGGATG
GATCCACGGTCTGGTTGTGTTCACTGGTCACGAAACAAAGCTCATGAGAAACGCCACAGC
TGCTCCTATCAAGAGAACGGCCGTGGAACACATGCTGAACATCCAGATCATCTTTTTGTT
TACAATTCTCATTGTTCTGGCCGTGGTTTCCTCTCTGGGTAATGTTATCATGATCAGAGT
CAACACCAATCAGCTGAGTTATCTCATGTTGGCGGACCTGAATCTCGGAGCACAGTTCTT
CCTCGATCTGCTCACTTACTGGATTCTCTTTTCTAACCTGGTGCCAATTTCTCTGTTTGT
GACTGTCGAAATCATCAAGTTCTACCAGGCTTACCTAATTTCCTCTGATCTGGACATGTA
CTACCGACCCACAGACACTCCTGCCGTTTGCAGATCGTCTTCATTGGTTGAAGAGCTGGG
CCAGATTGGCTACGTCTTCTCAGACAAGACAGGTACTCTGACTCGAAACATTATGGAGTT
CAAGGCCTGTTCTATTGCCGGGCGAGCTTATGCAGAGGAGGTTCCCGAGGACCAACGAGC
GACCGAGGACGACGATAACAACGCCGACGACCCTGACTCGTTCGGATTCCACGACTTCAA
CGAGCTCAAACGATCCACTACTCAGCATGCATCTGCAGGAGTCATCCAGGAGTTCCTCAC
TCTGCTGGCTACTTGTCACACTGTCATTCCTGAGATTCGAGACGATGGCTCAATCAAGTA
CCAGGCCGCTTCTCCCGATGAGGGTGCTCTTGTTGACGGTGCTGCTACCCTCGGATATGC
CTTTGCTATGCGAAAACCCAAGACTATTGGAGTTGACGTGAAACACGATACAGATACCAA
CCCTGCCGAGAGCCGGGAGTACGAGCTTCTCAACGTCTGTGAGTTCAACTCGACCCGAAA
GCGAATGTCTGCCATTCTGCGATGCCCTGATGGAAAGATCCGACTGTATTGCAAGGGTGC
AGATACCGTTATTCTCGAGCGTATGGCGCCCAACAATCCCTACGTAGACGCCACTATGCG
ACATTTGGAGGGATTTGCCGCCGAAGGTCTCAGAACTCTTTGTTTGGCTGTCCGAGTTGT
TCCTGACGAGGAATATGCTGCGTGGAACAAGCGTTTCGTGGAAGCTCAGACCACTCTCAA
CAACCGAGCCCAGAAACTCGACGATTGTGCTGAGGATATTGAGAAGAACCTGTTCCTCCT
CGGAGCTACAGCCATTGAGGATAAGCTTCAGGATGGTGTTCCTGAGACTATCCACACTCT
CCAGTCTGCTGGAATTAAGGTGTGGGTGCTCACCGGTGACCGACAGGAGACCGCCATCAA
CATTGGAATGTCTTGTAAGCTGCTGTCTGAGGACATGTCGCTTCTGATTATCAACGAGGA
AGACTCGGCTTCTACTCTGGATAATATCCAGAAGAAACTGGCTGCCCTACAAGGGTTGCG
AGAGAACGACAGTGACTCTCTGGCTCTGGTAATCGACGGCAAGTCTCTTGGATTCGCTCT
TGAGGACGAGATGGAGGAAATATTCCTAGAACTGGCTCTGCTTTGTAAGGCTGTCATTTG
TTGTCGAGTCTCGCCTCTTCAGAAGGCTCTTGTTGTCAAGCTGGTCAAGCGATACACCTC
CGACTTGCTTCTGGCTATCGGAGACGGTGCCAATGATGTTTCTATGATTCAAGCTGCTCA
CGTGGGTGTTGGTATTTCTGGTATGGAGGGTATGCAGGCCGCCCGGTCTGCTGATGTGTC
TATTGGCCAGTTCCGATACCTGCGAAAGCTGCTGCTTGTACATGGAGCCTGGTCCTACCA
GCGACTGTCTAAGGCCATTTTGTACTCTTTCTACAAGAATATTGCTCTGTACATGACCCA
GTTCTGGTACACCTTCTTCAACGGCTTTTCCGGTCAGTCGATTTATGAGTCGTGGACCAT
CACCTTCTACAATGTCTTTTTCACCGTTCTGCCTCCATTTGTCATTGGTATCTTTGACCA
GTTCATTTCTGCTCGTTTACTTGATCGATACCCTCAGCTCTACCAGCTTGGTCAGCATCG
AGCCTTCTTCAACGTTCGACAGTTCTGGGAATGGGTTGCCAACGGTTTCTACCACTCCAT
TATTCTGTATTTTGGTTCTTGCGGTGTATACATGACATCCAGAGAGTTGCCCAACGGTCT
CACTACCGATCATTGGGTTTGGGGTACTGCTCTTTTCACCTCGTGTATCCTAACGACCCT
CGGTAAGGCTGCTCTGGTGACCAATATGTGGACCAAGTTTACGCTGATTGCCATTCCCGG
CTCGTTCCTGCTTTGGATCGGTATTTTCCCTGCATACGCCACTGTGGCTCCCATGATCAA
CGTGTCAAGAGAGTACCGAGGCGTTCTGGCTCACACTTATCCTACCATTGTGTACTGGGC
CATGACCTTTTTGCTGCCTACCATCTGCCTGCTCAGAGACATGCTGTGGAAGTACTACCG
GCGAATGTACGATCCCCAAGCCTACCATTACGTGCAGGAGATCCAAAAGTACAACATTGC
CGATTACCGGCCACGAATGGAGCAGTTCCAGAAGGCCATCAGAAAGGTGCGACAGGTACA
GCGAATGCGAAAGCAGCGAGGTTTTGCCTTCTCGCAGGCCGATGAAGGCCAGGAGAAGGT
CATTCGAGCTTACGATACCACTCAACAGAGAGGTCGACACGGAGAGATGCGTCATGCAGA
CGAGTACCGTACTGACGAACACAGCGATGACGGCTACAACAACAACAACAACAACAACAA
TCCCTTCGACGATTCTGCGCATAAGAACTTGGCTCCCAATCCTTTTGAGCTAGAGTAACT
GGAGGAGGAAAAATAGACATTAGGCTACATGGGTTGCAGTAGTCTGTTAAATGATTTGGT
TATGATAAATACGGGAAGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34551g_CDS-001

Protein length: 1334 aa.
Product: Calcium transporting ATPase, putative

>YALI0E34551g_CDS-001 MSYQNFNLLDVDDDDFEPKGPGGSQHQHQPGPSSSRPTLTPFDSIQDGDTFIEADDYDAY
GDSGKRPMEKPPQRGNSMYGNMKARLGFGDPDYSEMDLPLNERTPYERDAESINAGISDA
RPSGTMNRTKIRSKVKKSTMSMPDFDIRRMWNRMRGHQEERGPDGPRVVHLNDPDANSAL
RYGDNHISTTKYNLFTFLPKFFFEQFSKYANLFFLATACIQQVPNVSPTNRWTTILTLLV
VLIVSAVKELVEDFKRAAADKELNSSTAYVLEGSSFVARKWIDVAVGDIVRVDSEEPIPA
DVVLLASSEPEGLCYIETANLDGETNLKIKQAHGDTAPYVSPSELSRVRGQLDSELPNSS
LYTYEATLKIDGRPPIPMSPEQMLLRGATLRNTGWIHGLVVFTGHETKLMRNATAAPIKR
TAVEHMLNIQIIFLFTILIVLAVVSSLGNVIMIRVNTNQLSYLMLADLNLGAQFFLDLLT
YWILFSNLVPISLFVTVEIIKFYQAYLISSDLDMYYRPTDTPAVCRSSSLVEELGQIGYV
FSDKTGTLTRNIMEFKACSIAGRAYAEEVPEDQRATEDDDNNADDPDSFGFHDFNELKRS
TTQHASAGVIQEFLTLLATCHTVIPEIRDDGSIKYQAASPDEGALVDGAATLGYAFAMRK
PKTIGVDVKHDTDTNPAESREYELLNVCEFNSTRKRMSAILRCPDGKIRLYCKGADTVIL
ERMAPNNPYVDATMRHLEGFAAEGLRTLCLAVRVVPDEEYAAWNKRFVEAQTTLNNRAQK
LDDCAEDIEKNLFLLGATAIEDKLQDGVPETIHTLQSAGIKVWVLTGDRQETAINIGMSC
KLLSEDMSLLIINEEDSASTLDNIQKKLAALQGLRENDSDSLALVIDGKSLGFALEDEME
EIFLELALLCKAVICCRVSPLQKALVVKLVKRYTSDLLLAIGDGANDVSMIQAAHVGVGI
SGMEGMQAARSADVSIGQFRYLRKLLLVHGAWSYQRLSKAILYSFYKNIALYMTQFWYTF
FNGFSGQSIYESWTITFYNVFFTVLPPFVIGIFDQFISARLLDRYPQLYQLGQHRAFFNV
RQFWEWVANGFYHSIILYFGSCGVYMTSRELPNGLTTDHWVWGTALFTSCILTTLGKAAL
VTNMWTKFTLIAIPGSFLLWIGIFPAYATVAPMINVSREYRGVLAHTYPTIVYWAMTFLL
PTICLLRDMLWKYYRRMYDPQAYHYVQEIQKYNIADYRPRMEQFQKAIRKVRQVQRMRKQ
RGFAFSQADEGQEKVIRAYDTTQQRGRHGEMRHADEYRTDEHSDDGYNNNNNNNNPFDDS
AHKNLAPNPFELE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG