YALI0E34529g

Overview

Description weakly similar to uniprot|Q7ZVT8 Danio rerio Similar to COP9 constitutive photomorph
Locus type CDS
Locus tag YALI0E34529g

Location

Species Yarrowia lipolytica Positions 4106196..4107476
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1281 (nuc.)
Previous locus YALI0E34507g Next locus YALI0E34540g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34529g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34529gYALI0E34529g_mRNA-001YALI0E34529g_CDS-001

Nucleotide sequence

 

>YALI0E34529g
ATGACAGCAGCAACCGACAATTGGATACAGAACGTCATCCGAGCCGGCGAAAACCGATCC
AAACTCGAACCGCTTCTGGAACAGCGACTTAAGGTCAAAGGCAAGTCGACCGAGGTTCTG
GAATCATTCAAAGACGTGACCCGCTTCTCTGTAGTGTGGGCCAACGAGCTCGTCCGTCTG
AGCAACGAGCTGGATACGTCCATCTTCCTCTACTATGTGGACACCTTCTTGCAGCAATTC
AGCATCCAGCGACTCAGCGCCTTTCCCCATATTCTGTCTAGTCTACTCGACCAGTTCAGT
CACCATGTCATCAGAGCCAAACGACCTCTTCTGGGCCTGTCATTATTACAGCCTAGATTG
CCCGACAAAAACACCATCACCCCCATGCATGCGCAGCTGATGCGTCTCTCTTTCGAAGCC
AACAAATGCTCCGTTGGCCTGGAAGTGCTCGACCGGGAGTTCCTCTCCCTGGACAAATGT
GCGACCCGAAACGACCTGGCTCTATTTCACTTCTACGGAGCTCTCGTCTACATTGCCTAC
AAGGAGTGGGAGAAGGCCGACGACTTTCTAGCCATTGCCATTGAAGCAGGAGCTACCCAG
ACCACAACTCGACCCTGGATCGTCAGATTCGCCTACTCACGAAGAATCCTGCTCTCTCTC
ATTATGGGCACACCTCTTCCAAAGATCCCGAACCCCAACAGCTCGGAAGTGTCGCCCTCA
GATGACCTGCTGGCCAGAGATTGCCACCCATACCACGCACTTGCATTGGCAGCTCATTCA
TCTGACCCCAAACAGTTTGTCCAGACAACAGAGGCACAAATGGAGACATTCAAAAATGAG
GGTACGTGGCAGCTGGTTGTCACGGCGCGTCTGTGTTTCTTGCATGGTCAGCTGAGAGAG
TCGCATAAGGCATATTCTCGTGTGCCTCTCAAGGACGTGTCTGCTGCCAGTCCCCGGATT
CTGTCCAACTACGGCCGAATTGACGAGAGTAATGATGCATTTGTGTTTGAGACCGTCTGC
TCCAAGGATCCCACCCGGGAAACGGTGCAGTTGCTGGACCAGGTTGTGCGTATGAAGAAT
TTGGTGGAGGAGAAGGGCATTGCCACCACCAACACGTCCAAGTTCCTAAAGTCTTTGCAT
GATGTGGAACAAAAGCGGGAGGCCCCCACAGTCACTCTAAACATGGCCATTAGTGATGAT
GACATGTTGTAGGGTGGACTGTTGGGTCCATGATCAGGTTTTTCCAAGTAATTTTATAAG
CATACAACTCATACCCTGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34529g_CDS-001

Protein length: 404 aa.
Product: Conserved hypothetical protein

>YALI0E34529g_CDS-001 MTAATDNWIQNVIRAGENRSKLEPLLEQRLKVKGKSTEVLESFKDVTRFSVVWANELVRL
SNELDTSIFLYYVDTFLQQFSIQRLSAFPHILSSLLDQFSHHVIRAKRPLLGLSLLQPRL
PDKNTITPMHAQLMRLSFEANKCSVGLEVLDREFLSLDKCATRNDLALFHFYGALVYIAY
KEWEKADDFLAIAIEAGATQTTTRPWIVRFAYSRRILLSLIMGTPLPKIPNPNSSEVSPS
DDLLARDCHPYHALALAAHSSDPKQFVQTTEAQMETFKNEGTWQLVVTARLCFLHGQLRE
SHKAYSRVPLKDVSAASPRILSNYGRIDESNDAFVFETVCSKDPTRETVQLLDQVVRMKN
LVEEKGIATTNTSKFLKSLHDVEQKREAPTVTLNMAISDDDML*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG