YALI0E34353g

Overview

Description similar to uniprot|P53166 Saccharomyces cerevisiae YGL064c similarity to YLR276c and YKR024c
Locus type CDS
Locus tag YALI0E34353g

Location

Species Yarrowia lipolytica Positions 4082148..4083787
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1640 (nuc.)
Previous locus YALI0E34331g Next locus YALI0E34375g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34353g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34353gYALI0E34353g_mRNA-001YALI0E34353g_CDS-001

Nucleotide sequence

 

>YALI0E34353g
ATGTTTGCGAATTCGTTGAGAAGAATCACAAAACCATGCCTGGGGGTCCCAGACATGGCC
GTGCGACATATTGCCATGCGCCCAAAACCCAAGGTCAAGGTCAACTCGCGAGAAGGAGGA
GGCAAGGGAAAGCCCAGACCTTCCACTGGAGTACGACGAAAGCCACCGGGGGCCCAGAAG
CAGCAGCCAGCATCGATAGCTATCAACGGCGATGCGGCACGACGGCTTCTCGAGTCGAAA
TTTGCCGCCAACATCTCGTCTTTCAATGAACTCAAGCTGCACCCTGATGTGAGAGCTGTC
CTGCCTGATGTGATCCAGCTGCCTGAACACAAGCAGGATCAGGATATCAAACCGTCTATC
ATTCAGAGTCTTGCTGTCAAGATCATGCGACAGAGCTACACCTACAAGCAGCGAGTCAAG
AATGAGGGAGAGGAGCCTACTGTGGAGAAGATTCCTGTGGATAGACAAAAGACCTTCGTG
CTGGCTGCCCAGACTGGATCCGGAAAGACTTTGGCTTACTTGTTGCCTCTTCTCTCTGAC
CTCAAGGATCAGGAGAAGTTCCCCTCTTGGCAGCTGGAGAAGCACTACAAGACTGTGCGA
AGTGTCATCTTGGTGCCTACTCTGGAGCTGTCTCAGCAGGTTGGACAGGTGCTCAAGCAG
TTTGAGGAGCCTCTTGGAATCAAGACTTTTGCCTCTGCCTTTGGACAGAGCCACCAGGAG
ATCGCCAAGGCCTTCAACAACCGTCTGGACGTACTAGTGACCACCCCCCAAAAGCTCCAG
CAGACTCGAGAGAAGAACCTGGGAGGTGCCACCCATCTTGTCGTTGACGAGGCCGATACT
CTGTTCGATACCAACTTCATTGACTCAACTACCGACGTGATTTCCCAGATGCCCAAGCTC
AAGTGTGCTGCCTTTGTGGCTGCCACTGTATCCAAGTCATTTCTGCGAAAACTGCGAAGC
TTCTACCCCCATGTTGTTGTAATTGCTGCCCCCCGGCTACACGCTATCCCCGACCACATT
CGGTTCTCTGTGGTCGACGTGAACAAGGCTCCTTACTACAACAACAAGAAGGTGGCTCTA
CTGCAGGCTCTGTACGCCATCTCACACTCTCAGAAGCAAAAGAACTACGTGCGACGAGTG
GTTGTGTTCCGAAACCGTAAGGAACATATCCCCGAGCTCAAGAAGTTCCTCGAGGAGAAC
GGCTACCCTGTTGATACTCTTCACGGCAAGCAGGATCTCCACGAGCGAAACGAGGTGGTG
GAGAAGTACACCAACATGCCAGATGCTGCTGACCAGACTGAGAACGCTCGAAACGTTCGG
GTCCTGTTGACCACCGATATCGCCTCCAGAGGCATGGACATGAAAAACCTTCGATTTGTG
GTTCTCTACGATGTACCATTTGACAAGACCGATTTCATCCATCGAGTCGGAAGAACTGGC
AGATTTGGCCGAGAAGGAGAGGTCTACATGTTCACCGACAACCAGGACAAGAAGGCCCAG
ACTAACCAACTTTTGCATACCAGTAGAAACGGTCTTTCTTTGTAAGCTGAACGGACCACA
CCAAAACGGCCCTTCTCTGAAGAGACGGGCCACACTAAACTGTACATAAATTTATTCATG
AGCATTGTTAATATCGTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34353g_CDS-001

Protein length: 515 aa.
Product: Mitochondrial ATP-dependent RNA helicase of the DEAD-box family, putative

>YALI0E34353g_CDS-001 MFANSLRRITKPCLGVPDMAVRHIAMRPKPKVKVNSREGGGKGKPRPSTGVRRKPPGAQK
QQPASIAINGDAARRLLESKFAANISSFNELKLHPDVRAVLPDVIQLPEHKQDQDIKPSI
IQSLAVKIMRQSYTYKQRVKNEGEEPTVEKIPVDRQKTFVLAAQTGSGKTLAYLLPLLSD
LKDQEKFPSWQLEKHYKTVRSVILVPTLELSQQVGQVLKQFEEPLGIKTFASAFGQSHQE
IAKAFNNRLDVLVTTPQKLQQTREKNLGGATHLVVDEADTLFDTNFIDSTTDVISQMPKL
KCAAFVAATVSKSFLRKLRSFYPHVVVIAAPRLHAIPDHIRFSVVDVNKAPYYNNKKVAL
LQALYAISHSQKQKNYVRRVVVFRNRKEHIPELKKFLEENGYPVDTLHGKQDLHERNEVV
EKYTNMPDAADQTENARNVRVLLTTDIASRGMDMKNLRFVVLYDVPFDKTDFIHRVGRTG
RFGREGEVYMFTDNQDKKAQTNQLLHTSRNGLSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG