YALI0E33825g

Overview

Description weakly similar to uniprot|Q7S6K9 Neurospora crassa NCU04826
Locus type CDS
Locus tag YALI0E33825g

Location

Species Yarrowia lipolytica Positions 4016338..4020781
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4444 (nuc.)
Previous locus YALI0E33803g Next locus YALI0E33847g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33825g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33825gYALI0E33825g_mRNA-001YALI0E33825g_CDS-001

Nucleotide sequence

 

>YALI0E33825g
ATGTCTTACACTCGTGGCACTAGGAAGAAGCATCTGGCTCGACACAGGTCCACGCCAGTG
TTGGCCAACAACTCACGCTGGAGCGACACATCTTCATTGGGTGCCATGGACTCGCCCAAG
CCGCCGACTGCGACACAAAAAGATCTGAGACGCGACATCTCTTTCCATGTGGCAACCCCC
GACCGAAGTGCATTTATTGGGGCTGATGACAGTCCGACCAGCGAGAGCGGAGACCAGTTT
TTTCTCAGCGGCTGGAACGGACGAGTGGAAGATTACAGCTACCAGAGCATCTTCAGCAGC
GACGACGGCGACTCGCTGACTGGCAGCCAGTTCAGCGCCGTTCTGGCGTCAGCTCCCCAT
GTGTTTGTAAGGCCCCCTTTTGAGGCTGTCGGAGAGTCTGCATTTGAGAATTCAGATTCA
GACAGCCTGCCACACAGCTCCATGAACACGACCATTGATAAAGACGTCCACAGATTTCCC
TCGACCTCTCCTCTTTATACCAAAGACCCCCCTACAGCTGCCCCCACCACTCTCGGAGCA
CACCAGGAAGCGTCCCACATCCCCCAAGACATTCCTGATCCCCAACAAGCCTACTTCGAC
TACGCTAGCGACTCCGGAAGTGATCTCTCCAGTTGCGCTACCACTCCCACAAACACTTCT
GCCATCAGACACCGCCACAGCCTGACATTGTCACCAACCATGAGTGGATCCACGACAAGC
TCGAACCGACAAGCGCTGGATAACATTTCCAATAGACCCAACCCTCGAAAGAGAAGAAAG
TCCTGGAACCCTTCAGAGTCACCGGTGCGTGGGGGGACTGAAAACCACCCAATTGACAAT
AATGCCCCTGTCGCTTCGTCGTCTGTTGATATGAGATCTACTTCCCCCTCGCCCGCTGAG
GCCGGTACGTCTTCCGGGCCAGCTGATACTGTGCAGACGAGCGCTGCTGGCGAGTTCTCT
TTGCACCCCACGTCTCTCAGGTCGGCTTCTGCTCCCGGTCCTGTTGCATCCTCATCGGCG
GATGCTCCGAACCGAGTGACCATTTCTAAAAGGGTTTCTTTTGCCAGAATACCTGTTCAT
ACCGCTGCTACCCCCCCAGAGCCTCTTCCTTCCACGCCATCGTCTCTACAGGAACAGCGG
AATACCCCTGGTGATCTTAACCAATCCCGTGCTCGTACATCTGCTGCTTCTACTGAGCCG
GCTACCCCTGTTTCTGCTCCATCCACTGCACCCGCACCCGCTACTTCTACACCGGTAGCC
AGGTCTGCCCTTGTTTCTTCGGCGGCTGAGAGGACGCCAGTCACTTCCGCGGTGGTCGTC
TACGGCCAAGAGCCGCCAGCGCAAGAGCCTCCAGTGCAAGAGATGCTAGTGCCAGAATCT
CCAGTGCCAGAGCCGCCAGTGCCAGAGCCACCAGTGCCAGAGCCGCCAGCGCAAGAGCCT
CCAGTGCCAGGACCGCCAGCGCAAGAGCCGCCAGTGCAAGAGACGCTAGTACCAGAATCT
CAAGTGCAAGAGCCTCCAGTGCCAGAGCCGCCAATGCAAGAGCCGTCAGCGCAAGAACCG
CATGTGCAAGAACCTCGAGTGGAACAAGAGCAGCCACCGCAAGTGGCAGAAGAAAATGAG
CCTGCGGTAGAGGAATTTCATTCGCCAGAGGAGCATCTTCCTATGGAGGATTCTTGCTCA
ACCGAGGAATCCCACCCGACAGAGGAGCCTCCATCACTGGATGAACAGGAGTTGCGACGC
CACTCTGACACGTTCGAGCGCTCGACTCGAGAGCAGCATGAGGGGTATCGTCATCGACCC
AACCCTGTTGTTACGCGCTACTCATCTCTCTCCGAAAGGTGTAGACGTCTCTTCACTGCG
CTGACTGCTGAGTGTAACAAGGTCGATGCTCTAAAGACCGATGTTGCGAACTTGAATCAG
ACCATTACGCGCCTGGAATCTACCACTGTGCCTAAACAGGATCTCGTGACTGCCTCTGAT
ACCTACGCCATGTTGAAGGAAGCCAATACAAAACTCCGTTGCAAGCTGAATAGCAGTAAG
AAGGATTTGCTGTCGACCATGACAGGATTGGCTGACCGCCTTGAAGCATTGCATCGTGGA
GTGCAAGATGCCCAGAGCCATGATGATGGATTGTGGGACGATAAAGATGGAGTGCCGAGC
TCTTTGTCATGCGAGCTTGAACGACAGGAGATCAAGATCAACGAGACTGTCGACGAGGCG
AACAAGCTGACCTTGCGAATTTTTAAGCTGACAGATGAGAAGAACGAGCAGGCAGGGGAG
CTGGAGGCGCTTCAATGCAATATCAAGGATTCCTTTACCCACAGTGATAATCTTAAAGAC
CAGGGCGTGGTAGATGGTGTTCAGAAGCCTGGCGTCCAGGAGCCTGCCAGCGTTGTCGAT
AACATTGTCGTGTCGGGAGATCCTGTACAGAAAAGCCCACATGATGTTATTGATGATGAG
AAAGATGCACTGCGCCAGTCTGTCGAAAGGCTGGAAGCCCAGATCGTGAAACTTCAGCGT
GCCGAGAAGGTCGCGACCAAGCGTATTGCGGACAGCAAGGCCACGGAAGTGATTCTTCGG
GAAAGGATTGCCGGTCTCGAAGAGAAGCTCGAGTATTCACAGGAGACAACGAAGGAGAGG
ATGGATGAGCTGCTGGGTGCTCTCGATCAGGCTCAGCAGGAGAGGACACGGGCGGTGGCC
GATCTTGAAGCGAAGCAGGAGGTTCTGGCGGAGAAGTCAGCCCAGCAGTTGGACCTTTCT
GCCTGTGTCACTTCTTTGGAGTCTCAGCTCAAGAGTGCTAAGATCGAAAAATCTCAGATT
AGCTCCACGCTTACCTCCAGTCAAGAGGAAATTTCCGTGCTGACGGCCACCGTGGCTCGA
CTGGAGTCTGCTGTAAAGGACAAGGACGATGAGATCTTAGCTCTGTCCAACCAGGTAAAG
CTGGGTGGCAGCCAGGCTTCCAGCAAGGTCCGGGATCTGGAGTGTCAGCTTGAGGCGGTT
AACAAGGAGTTTAAGCAACTCGAGAATAACCACACCCACACCAAAATTGCACTGAACGTT
GCTAACCGTCTCAAGGCGACTGGGGACGAGAATCTCGCAGAGGCCAAAGCTCAGATCCAC
CAGCTCAAGACCCAATTGGAGACGGACCACGCGCAGCTTCTCGGCGAGCAGGAGGCGGCC
GAGAGCGGTCGCAAGGAGCTTGAAGGGCAGATCCGGGCTCTTGCTGGTCAGGTGCTGACG
TGCACGGCCTACACCCCCATCGAAGTTCTGCTCTCTGGACTTCAGCAGAGCATCGACACT
CTCAAGACCACTCAAGCAGAGCTGAAGAGGGCCCGAGCGTCTGTCAGCGCCAAGTTCAAG
GAGGAGTGCAACCGTGTCGAATCTCTGCAAAGCCAGCTTTCTGCCGAAAGAGAAGACCGA
GAGCGGGAGAGGCTGGCTCATAAGTCCGACCTCGACTCCTACGTTCTCATGTCTGAGACT
TTGCAGAAGGAGAACGACGATCTTTCCAAGGCTGAGGCTTCCAATGCTGCCAAGCTGTTG
GAGGCGACTCGGGCCCGTGCGCGGCTGGAGTCTTCAGAGCGAGTTCTCGCCGAGCGTTGT
CGATCTCTGGAGGCTCTTCAGGAGCGTGAGAGTCTTCACCAGTCTTCCAATGCCTCCGAG
TCTCTTCGATCTGCTGAGCTGAACCTTCTCAAACGGGAGAAGGAGCGGCTGCAGCTGTCT
CATGACCGTGAGATTGAACGTTTGAAGCTGGAGATCGAGAGCGAGAGACAGCGGCGTCTT
GATTCCGAGAACGAGCTGGCCCGTGGACGACGTCGGGAGACCGAGCGGCATGCGGAGTCT
CGTCACGACTCTTATCGAGACTCTTATCGAGACTACGAGCCTCATAGACGACGAGAGTCT
GGCGACAACGTTCGAGTCAACATCAACATTGGCTCCGACAGTGGTTACGGAGGCAAGGAC
CCTGCCCTGGTGTCTCTTGCTCGTCAGAAGATCGAGATGTTTCTGGCCAACGAGCGGTAT
CGTAGGTGTGCCGGGTCCATGACGGGAGCTGCACATGATGACGAGTACAACCGGCTGCAA
CTCTATCTAGTTGACTCGATGGGTGTCGAGCATGCTCGCAGGATTCTTACCATGTTGACC
CGTCAGCTCGGTCAGCCCGTCACTGCTCTGCCCAATGAGATTGACAAGCTCGTTGGCAAC
AAGGAGGTGCTCAGAAAGTCACTCGAGTTCATTGACGACGTGGTTCGGTACTCTAACAAC
GATCCTGATGGCCCTGGAATTCGAGCAGAGCCTGGATCTATTCAGTGGTCTTCCAACCTC
AACAGTGAAATGAGTCATCTGAAGCGTACATTGTACAAGTCGCACACCGGGAGGAGATTG
AGGTATTGATGTGGAGGAAGCTCTTTAATTTATATTCATTATTATGTCATACCATGTGTT
ATTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33825g_CDS-001

Protein length: 1463 aa.
Product: Conserved hypothetical protein

>YALI0E33825g_CDS-001 MSYTRGTRKKHLARHRSTPVLANNSRWSDTSSLGAMDSPKPPTATQKDLRRDISFHVATP
DRSAFIGADDSPTSESGDQFFLSGWNGRVEDYSYQSIFSSDDGDSLTGSQFSAVLASAPH
VFVRPPFEAVGESAFENSDSDSLPHSSMNTTIDKDVHRFPSTSPLYTKDPPTAAPTTLGA
HQEASHIPQDIPDPQQAYFDYASDSGSDLSSCATTPTNTSAIRHRHSLTLSPTMSGSTTS
SNRQALDNISNRPNPRKRRKSWNPSESPVRGGTENHPIDNNAPVASSSVDMRSTSPSPAE
AGTSSGPADTVQTSAAGEFSLHPTSLRSASAPGPVASSSADAPNRVTISKRVSFARIPVH
TAATPPEPLPSTPSSLQEQRNTPGDLNQSRARTSAASTEPATPVSAPSTAPAPATSTPVA
RSALVSSAAERTPVTSAVVVYGQEPPAQEPPVQEMLVPESPVPEPPVPEPPVPEPPAQEP
PVPGPPAQEPPVQETLVPESQVQEPPVPEPPMQEPSAQEPHVQEPRVEQEQPPQVAEENE
PAVEEFHSPEEHLPMEDSCSTEESHPTEEPPSLDEQELRRHSDTFERSTREQHEGYRHRP
NPVVTRYSSLSERCRRLFTALTAECNKVDALKTDVANLNQTITRLESTTVPKQDLVTASD
TYAMLKEANTKLRCKLNSSKKDLLSTMTGLADRLEALHRGVQDAQSHDDGLWDDKDGVPS
SLSCELERQEIKINETVDEANKLTLRIFKLTDEKNEQAGELEALQCNIKDSFTHSDNLKD
QGVVDGVQKPGVQEPASVVDNIVVSGDPVQKSPHDVIDDEKDALRQSVERLEAQIVKLQR
AEKVATKRIADSKATEVILRERIAGLEEKLEYSQETTKERMDELLGALDQAQQERTRAVA
DLEAKQEVLAEKSAQQLDLSACVTSLESQLKSAKIEKSQISSTLTSSQEEISVLTATVAR
LESAVKDKDDEILALSNQVKLGGSQASSKVRDLECQLEAVNKEFKQLENNHTHTKIALNV
ANRLKATGDENLAEAKAQIHQLKTQLETDHAQLLGEQEAAESGRKELEGQIRALAGQVLT
CTAYTPIEVLLSGLQQSIDTLKTTQAELKRARASVSAKFKEECNRVESLQSQLSAEREDR
ERERLAHKSDLDSYVLMSETLQKENDDLSKAEASNAAKLLEATRARARLESSERVLAERC
RSLEALQERESLHQSSNASESLRSAELNLLKREKERLQLSHDREIERLKLEIESERQRRL
DSENELARGRRRETERHAESRHDSYRDSYRDYEPHRRRESGDNVRVNINIGSDSGYGGKD
PALVSLARQKIEMFLANERYRRCAGSMTGAAHDDEYNRLQLYLVDSMGVEHARRILTMLT
RQLGQPVTALPNEIDKLVGNKEVLRKSLEFIDDVVRYSNNDPDGPGIRAEPGSIQWSSNL
NSEMSHLKRTLYKSHTGRRLRY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG