YALI0E33473g

Overview

Description similar to uniprot|P25618 Saccharomyces cerevisiae YCR017c Hypothetical 107.9 kDa protein in POL4-SRD1 intergenic region putative sensor/transporter protein singleton
Locus type CDS
Locus tag YALI0E33473g

Location

Species Yarrowia lipolytica Positions 3968534..3971461
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2928 (nuc.)
Previous locus YALI0E33451g Next locus YALI0E33495g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33473g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33473gYALI0E33473g_mRNA-001YALI0E33473g_CDS-001

Nucleotide sequence

 

>YALI0E33473g
ATGTCGAAAGAAAAGAACTGGAAAGGCACCACGCCGACCACCAAGTCGGACGCCCTCAAC
AAGCCGGGCACTTCTCTGCTCAGCGTCAACGGCAAGTATGTTGGCTGGGCCCACACCATT
GTCGCCATGTCTGCATTTCTGGGAGCCCTCATCATCGGCTGCGCTCTGCACTACAAGAAG
ATTGTCCAGAACGAGCACTTTGGCTACCCCGACGAGTGGTTCCCCAGTGTTTCAGCGGCC
ATTGGTGACCGATACCCCGAGCGATCTGTGTTCCAGGTCTTCATTGCCATCACTTCTGGC
CCTCGATTTGCCCTTGTCATTCTCTGGTTCCTGCTGACTGTCGCTCACCGACCCCGTCTC
TCCATGATGATCCTCATCTCCGGTCTGATGCGAACCCTTACTTGTGGCGGTTGGACCTAT
GTCACCTCCACCGACGACCACGACTGGCACGACATCTTCATGATCTCCTACATGGTTCTG
ACCATCCCCTGGACCGTGGGATGCACTCTTTGCACTCGAGACGCCAATGCTCGAAAGTGG
AGAAAGATCGTCGCTACCTGCTTCTTCGGATCAATCCCCCCCCTCATCTACTTCTTCATC
CAGCACAAGGTCCACCATATTGCCGGTGCCTACACCACCTACGCCTTCCTGGAGTGGGCC
CTCGTCATCTTCGACGTGATGTTTGACGCCGTCACCGTTCTTGACTTCTCTGCTCTGGAG
CTTAAGGTTATCGATGCCAAGGGAGTCACCGCCGTGACCGAGCCCAAGAAGGTCCTGGCC
ACCGCTGGCTTCAACTTCTTCCGATTCTCAATCGACGTTGCCAACGCTACCATTTTCTGG
TCTGTGCTCACCGCCCTGCCCCTGCTTATCTGGTACTTCCCCCTGTGGTTCATGGGCATC
TCCGGCTACGAGGCTCTACTGGTTTCCATCTGCGCACCCGTCATCCTCTACATTTCTCCC
CTCCGAAAGTTCTTCAACCTCGTCCCCCAGCTGCCCCTGCTGCTCGGTGTCACCGGAATT
GCTGCGTGGTGGATTCCCGGTCCTATCCCTCGACTCGAGGCTGTTGGCTTCGGCGCTGGT
TTCTGCTGCATCGCCATGGCTAACACCTTTGCCAACTCTGCCTCTCGACCTCTGCTCGGC
ACCTACAAGGGATCTGCCTTCATCCTGGGTCTGATCATCACCTCTCTTCTCAAGTTTGCC
CACTGGACCAACAACCCCATCTGGCCCATCATGCACGAGGCTAACGGAGGCTGGAATACC
GCCGGTGTCATCGTGGGCGTCGCGGCTGCCCTCCTGGTGTCCAAGCCCCAGAAGAACTCT
GCCCAGGTTCCCGTCCATCCCTCAGAGACCTCCATTGGCGCCGCTTTCGGTGTCGGTGGT
ATCATCTTCGCCCTGCACTCTCTACTCTCCGATACCTCAACCATCATTCTCTGGGTATGG
GACGGCTACCCCGTTAAGGGTCCCGTTCCCGTTCCGTACGGAGTTGTCACCATCCTGGCC
ATGTGCCTCGGTGTCTGGCTCGGAACAAAGAAGCTTGCCAATGGCTGGATCCCCTTCCTG
GCTTCTTGCGTCGGAACAACTATCCTGTACAGTTTCCACGGATGGATCGGGTACGCTGGA
GGTCTCACCCTGACCGTCTACCTGTGTGCAGTGGCTCCCGCTTTCCTTGAGAACCTCGGC
CGATACAACTCCGGTACCTGGGGTCTCGCCATGCTCGTAACCACGCTGCTGTACCTGGCC
CATGTCTGGATCGTTGCCTATGCCTTTGTTCCCGGAGGACCTGCTCTCCGAGAACGAACC
GACTACGTTCTCATTGCCCAGCAGCTCTCCATTGGTCTCGGTGTACTTGCCCAGTCCAAG
ATCAGCAACACCAAGAACAACACCAAGTCCAACGCTTCCACAGACGCTTCTCTGCTGAAG
AAGATCCGAGCCCACGTTATGCTAGCTATCATCTTCATTGCCACTGCCACCGTTGCTGTC
GGCTACAAGCGATTCGACCAGCCTGCCCCTGTTCCTTACCACCCCGAGGAGAAGCTCATG
ACGGCTGGTATCTGGACTGTCCACTTTGGTCTCGATAACGACATGTGGGCCTCCGAGGTG
CGAATGCGGAACGTCATTGAGGAGCTTGAGGTTGACGTGATTGGTTTCCTCGAGTCCGAC
ACCCAGCGTGTCATTATGGGTAACCGAGATCTCGGCCAGCGAATCGCTGAGGAGCTCGGC
TACTACTACGACTTTGGCCCCGGACCCAACAAGCATACTTGGGGCTGCTGCTTGCTCTCC
AAGTTCCCCATTGTTAAGTCTACTCACCATCTGCTTCCCTCTCCCGTCGGTGAGCTGGCC
CCTGCCATCCATGCTACTCTGGACGTGTACGGTGAGCTTGTTGACGTTGTTGTCTTCCAC
TCTGGACAGGAGGAGGATGTTGAGGATCGACGACTGCAGTCTCTCGGCATCTCCGAGATC
ATGAAGTCCGCTCCCGAGGGTCGACCTCTGATTCTGCTGTCCTATCTGGTCACCAAGCCT
CTGCAGGACAACTACCTCACCTATGTTGATGCCTCTGGCATGACCGATATCGATCCTTCC
GACTGGGACCGATGGTGCGAGTACATTCTGTACAAGAACATCAAGCGAACCGGCTACGCT
CGAATCTCTCGAGGAACCATCACTGATACAGAGATCCAGCTTGGTAAGTTTGTTCTTGAC
GACAAGACTCCCTCAACCAACAACCGAATCCAGGACGAGAACCAGGTTCCCGCTGGCCGA
CGATTCCCCGATCTGTTCCGAGGCCAGGGTGTCCGTGGCCATCGATTCCATGTCCTTGAC
GAGCCTGAGACTGGCAGCGGCTCTCCCCGATACTTTGAGTAAGAAAGTATGGAATAGATA
AAATAAGGGAATATACCCACTGTTCAATAAATGATATGATATATTTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33473g_CDS-001

Protein length: 954 aa.
Product: Sensor/transporter protein involved in cell wall biogenesis, putative

>YALI0E33473g_CDS-001 MSKEKNWKGTTPTTKSDALNKPGTSLLSVNGKYVGWAHTIVAMSAFLGALIIGCALHYKK
IVQNEHFGYPDEWFPSVSAAIGDRYPERSVFQVFIAITSGPRFALVILWFLLTVAHRPRL
SMMILISGLMRTLTCGGWTYVTSTDDHDWHDIFMISYMVLTIPWTVGCTLCTRDANARKW
RKIVATCFFGSIPPLIYFFIQHKVHHIAGAYTTYAFLEWALVIFDVMFDAVTVLDFSALE
LKVIDAKGVTAVTEPKKVLATAGFNFFRFSIDVANATIFWSVLTALPLLIWYFPLWFMGI
SGYEALLVSICAPVILYISPLRKFFNLVPQLPLLLGVTGIAAWWIPGPIPRLEAVGFGAG
FCCIAMANTFANSASRPLLGTYKGSAFILGLIITSLLKFAHWTNNPIWPIMHEANGGWNT
AGVIVGVAAALLVSKPQKNSAQVPVHPSETSIGAAFGVGGIIFALHSLLSDTSTIILWVW
DGYPVKGPVPVPYGVVTILAMCLGVWLGTKKLANGWIPFLASCVGTTILYSFHGWIGYAG
GLTLTVYLCAVAPAFLENLGRYNSGTWGLAMLVTTLLYLAHVWIVAYAFVPGGPALRERT
DYVLIAQQLSIGLGVLAQSKISNTKNNTKSNASTDASLLKKIRAHVMLAIIFIATATVAV
GYKRFDQPAPVPYHPEEKLMTAGIWTVHFGLDNDMWASEVRMRNVIEELEVDVIGFLESD
TQRVIMGNRDLGQRIAEELGYYYDFGPGPNKHTWGCCLLSKFPIVKSTHHLLPSPVGELA
PAIHATLDVYGELVDVVVFHSGQEEDVEDRRLQSLGISEIMKSAPEGRPLILLSYLVTKP
LQDNYLTYVDASGMTDIDPSDWDRWCEYILYKNIKRTGYARISRGTITDTEIQLGKFVLD
DKTPSTNNRIQDENQVPAGRRFPDLFRGQGVRGHRFHVLDEPETGSGSPRYFE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG