YALI0E33231g

Overview

Description some similarities with uniprot|H6C2Y1 Exophiala dermatitidis HMPREF1120_06014 hypothetical protein
Locus type CDS
Locus tag YALI0E33231g

Location

Species Yarrowia lipolytica Positions 3942355..3943721
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1367 (nuc.)
Previous locus YALI0E33209g Next locus YALI0E33253g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33231g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33231gYALI0E33231g_mRNA-001YALI0E33231g_CDS-001

Nucleotide sequence

 

>YALI0E33231g
ATGTCTTTCTCAGTGGACTCTTTCATGTCGAAGCTGTCGGCACTCAATGAGACCCAGGAC
TCAATTGTCTCGGTGTCTCAATGGATCCAGTTCCACCGACGAGCTTGCGGACCCATCGCA
CAGACCTGGTACGACTACATTCGAAACATTCCTCTCAAGCGAAAACTGGCTATGATCTAC
CTCGCTAACGATGTGGTCCAGCAGGCCAAGGCCAAGAAGAGAGACGAATTCATCGAGGCG
TTTTCCACTGTCATTGTGGACGGAATAGTATCCACCTACCGCGAGGGCAACACCGATCTC
CGGAACAAAATCAAGCGAGTGGTGGAGGTCTGGGAACAGCGACAGGTCTTCAGACCCGAC
GTAATCGAGGAGATCAATAGCAAGACAAGACAGCTTGACAGCAGCGAAGGGCCCACCGGA
TCAGATGCCCTTGGAGGCAGTTCAATTGGAGGTACAGGACTCGGAGGCATTGGTGGATCG
GGACTTGGCGGTCTAGGGGGAATTGGGGGATCTGGCTTAGGAGGAATCGGAGGCTCAGGT
CTTGGAGGAATCGGAGGGTCCGGATTGGGTGGCATTGGAGGAACTGGCTTTGCAGATCTG
GGTGGCTCAACGGCAGCACCGTCAGTTCGATCCGAGTTGCAGGAGCTCAACACTCTGCTC
GGAAAGGTGACTAAAACTACGACCGTCACTGAGACCAAGAGCAAGCTTGAGTCCAGTCAG
AAGTCACGGGATTCGCAAGCTCTTGCTACTCTTCTTGAAACAGTAAACAAGACTATCACA
GACATTTCTGCCAACCAGAAGCTGCGCAGCGAGATTGATAGTGCTCTGCTGACTCTCAAG
AACAAGCAGGCGTCTCTCCTTGAAGAGGATAAACACAACATGACTATGTTCGAGAAGATG
AAGAAGGAAATCCAAGATGCTCAAAAGGAGGTCTCCAGTCTTGTTCAAGATACTAACGGT
GCGTCAGTTGAGCAGGCTCATCCTGAGGAGGAAGAGAACGACGATTACGTTCCTCAACCC
GCTTCGGAACCTGCTCCAAGCGAGCCTGAGTCTACAAAGCTGCCATTCTCAATCGCAGAC
GAGGAGGATGAGTCAGACTCTTACGAGCCCCTTCCAGCTGTGGTTACTGCTGGTGAGTCG
GGGTATGTGGCTCAGCCTCTTCCCAGCAACGATTTTTCTGTGCCTCAATACGAAGACGAC
TCTGATTCCGATGCCGACTCCGATGCTCCTGACTCCAAAAAGAGAAAGTTGGAGGGTGAG
GAGTGAATAATCCAAACAGGACACAAGCACAAATGTAACATACAAACCAATTCTAATATA
GCTACTTACTGTAAAAACCTGCACCATTAAATTATTTTGATTCTATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33231g_CDS-001

Protein length: 422 aa.
Product: Conserved hypothetical protein

>YALI0E33231g_CDS-001 MSFSVDSFMSKLSALNETQDSIVSVSQWIQFHRRACGPIAQTWYDYIRNIPLKRKLAMIY
LANDVVQQAKAKKRDEFIEAFSTVIVDGIVSTYREGNTDLRNKIKRVVEVWEQRQVFRPD
VIEEINSKTRQLDSSEGPTGSDALGGSSIGGTGLGGIGGSGLGGLGGIGGSGLGGIGGSG
LGGIGGSGLGGIGGTGFADLGGSTAAPSVRSELQELNTLLGKVTKTTTVTETKSKLESSQ
KSRDSQALATLLETVNKTITDISANQKLRSEIDSALLTLKNKQASLLEEDKHNMTMFEKM
KKEIQDAQKEVSSLVQDTNGASVEQAHPEEEENDDYVPQPASEPAPSEPESTKLPFSIAD
EEDESDSYEPLPAVVTAGESGYVAQPLPSNDFSVPQYEDDSDSDADSDAPDSKKRKLEGE
E*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG