YALI0E33187g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E33187g

Location

Species Yarrowia lipolytica Positions 3937642..3939216
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1575 (nuc.)
Previous locus YALI0E33165g Next locus YALI0E33209g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33187g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33187gYALI0E33187g_mRNA-001YALI0E33187g_CDS-001

Nucleotide sequence

 

>YALI0E33187g
ATGCTGCGAACGACATTGAGCCGGGCTCATGCTATCAATAAGGCTGCACCCTTGCTGAGA
GCACATTGCAACATCCAACCCATCACATGCATTCAGAGATTTTACTCGGCTAAGGAGCCA
GCGGCAAACGACCTCAAAGAGATCTCGACACCCGAGACAACACTGCGATCTCTCCACCCA
TTCCTGAGAGTCCATGACAGTACGAAATTTTCAGCCAACTTCCTGACTGTCGAGACCGAG
TCGGGGAAGCGAGATTTCGAGGATCGAGAGAAATATCGAACCTCAGTGGCTCTTCGAAGA
TCAGAGACCCCTCGAGAGAAGATCAAGGATATCCAGAACCGAAAGCAATATGTGGAGGGG
CTCGACAAGCTGTTTGGAAAGACCAAACCTGATAACCTAGTAAAACTGCACCAGGCGGTT
AAGACAGCCTCGCTGGCAGAGCTCAAGGACATTTGCAACAAGATTGACTCGGATGCTGTT
CTGGGAGACACATACGCTGCTCTGCCAAACTACCAACACGTGCGAAAGGGCGCTGCACTG
TCTGTTGTTGCTCAGAACATCATTTTCAGATACCAGAAGTTGACTGAGGAGGCCGGTGAG
CCTCTAGATGCGGATCCTCTGTTCAAACTGGTAGGATACATCTATGCTCGAGCCACTAAT
GACGTCAGCTTCTCTGCCGAGGCAGCTGATGCTCTTTTCTGGGCTACCTGCAAGTCTGGA
ACTATCGAGGATATCACTGCTGTGGCTACCATGCTTGCTGGGATGAACACTAGACCTTCT
GATTATACTGTATCCGAGGTTCTGGCACCAGCACTGCGACCTCTTACTAAGATCCCTGAC
GTGAACGAGAAGACTGCTGAGGTTATCAGCTTATTTGCTCTGCGACCTGTCTTCTGCCAG
GACATTCCTCCTAAGATGGCTACTATCATGTTTGGACTCTGCTCGCGAATGGATGAGTTT
GTGTCTGCCTTCAACAATGTGAGGCGAGTGGAATCTTTCAAGAACCGACACGCTGTGTTT
GAGGAGGCTGCTCCTGCCATGATCAAGGCTATCGTTCGATGTACCAAGAACGAAGTTACA
GCTAAGGGACCTGAGCAGGATGATATTTTTGTTCGATTCGAGGTTACCCGGCCACACCAC
CAGGCTATGGCTAACATGTTTTCACTTGCACGACTTCTAAGACATTCCGAGAACTCTTCT
TTTCCCCAGAAAGCCATTGAGACTGCATTGGTCCAGTGTGCCAAGGAGGGCAACATTGCG
GGACTTAACAAGGTCCTCTCGTGGACTGACCAGATCAGCAAGCGTGCCACTGAGAGAGTG
CTGGCATTGTTTCCCTACGCCCATGGCATGGCCGAAGAGCCTCTGACCCCTAGTATTGGC
ATCTCCAGCATGTTCCAGGAGACATCCTATGTTGGTCATGTGAAATTCCTGGAGTCCCTT
AAGAAGAAGACCGAGGCCAAGGAGCTTATCTCTGAGATTGACGAGAAGCTCGAATCCATT
GACTAATTTCTACAAGTGTAATTCTGACTACTGTAATCAATGCATGTAAATAGTATTATA
AATATGTCATAGTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33187g_CDS-001

Protein length: 502 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E33187g_CDS-001 MLRTTLSRAHAINKAAPLLRAHCNIQPITCIQRFYSAKEPAANDLKEISTPETTLRSLHP
FLRVHDSTKFSANFLTVETESGKRDFEDREKYRTSVALRRSETPREKIKDIQNRKQYVEG
LDKLFGKTKPDNLVKLHQAVKTASLAELKDICNKIDSDAVLGDTYAALPNYQHVRKGAAL
SVVAQNIIFRYQKLTEEAGEPLDADPLFKLVGYIYARATNDVSFSAEAADALFWATCKSG
TIEDITAVATMLAGMNTRPSDYTVSEVLAPALRPLTKIPDVNEKTAEVISLFALRPVFCQ
DIPPKMATIMFGLCSRMDEFVSAFNNVRRVESFKNRHAVFEEAAPAMIKAIVRCTKNEVT
AKGPEQDDIFVRFEVTRPHHQAMANMFSLARLLRHSENSSFPQKAIETALVQCAKEGNIA
GLNKVLSWTDQISKRATERVLALFPYAHGMAEEPLTPSIGISSMFQETSYVGHVKFLESL
KKKTEAKELISEIDEKLESID*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG