YALI0E32989g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E32989g

Location

Species Yarrowia lipolytica Positions 3925148..3926170
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1023 (nuc.)
Previous locus YALI0E32967g Next locus YALI0E33011g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32989g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32989gYALI0E32989g_mRNA-001YALI0E32989g_CDS-001

Nucleotide sequence

 

>YALI0E32989g
ATGTCTCTCTATCTGCTGGAAACCAAGCCTCCCACAGAGATCACCCTTGAGGATGACGGC
GTTCAATGCAAGGTCGACAATGTCGTCTTCACTTTTCCCATGGATGACGATGTTCCTTTT
GTCCCTTCCTCGGAACCTCTCCAGTGCTACCCTCTAGGTGGATCAGCCTATGTTGTGCTG
TCCTCCAAGGACCAGGTCCGACGAGCCAGCGTGTTGTTCCTTGATCTCAAGACTAGTCAG
ATCCAATGGAAGAGCATGAAGAAGGTGTGTCCCGAGTTTTGGTCTTATGGAAGCCACTTG
GCTGGAGTTCAGGATGCGACCTCCATTCTTGATGCTCTCAAGATGGTGGGCGATATTCAG
AGCAAGGTGAAACAGGTTACCGAGAAGCAAGCGTTTAGTGCTTCAACCGAGTCTTTCGGA
CTGAACAGGCTGTCGCTAATGGGCTCTATCCCCCCCGGTTTCTCCGATTCAACTGTTGTA
TGCTCTGAATCGTTTCCTCGCCAAAGCCATCTGGTGATTCTCGCTACCAATTGGCCTTGG
ATCAGTGATAAGCTTCCCGGATTTGACGACAACAGAAGCGACGAGAAGATCACTATCTAC
ATCGAGGCAGGCTCACAGGCAGTAGATGTACTTGTTGACTTTATCTACGGAAAGCCCGTC
AAGCAGATGCTGAACGCCACAATCATCCTAGAGCTGGCAAGATTCAACTCAATTCCCATC
ACCATCAACGGTAAGAAGCATTCCAACGCACACCTGCCTCCAGGACTTTGGGAGGAGTGT
CTTCAATTCGAGCCTATCCCTCAGGACTTTGTGAGACTGTGGCGGATCCCTTACTTCAAG
AAGAGATTGGAAAGCTTCTTTGGACAGAACAGAAAGGCTGTCATGGAGACCGACGAGGTT
ACATACTTGTCTAAGGAAGAACTCCTGGAGCTGTTGCGACTATAGTACAAGGTACAGCAA
TCGCACATCTACACAACACACATAGGCACAATATATATAGAGAATAGTTTTGGTGCATAC
TAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32989g_CDS-001

Protein length: 315 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E32989g_CDS-001 MSLYLLETKPPTEITLEDDGVQCKVDNVVFTFPMDDDVPFVPSSEPLQCYPLGGSAYVVL
SSKDQVRRASVLFLDLKTSQIQWKSMKKVCPEFWSYGSHLAGVQDATSILDALKMVGDIQ
SKVKQVTEKQAFSASTESFGLNRLSLMGSIPPGFSDSTVVCSESFPRQSHLVILATNWPW
ISDKLPGFDDNRSDEKITIYIEAGSQAVDVLVDFIYGKPVKQMLNATIILELARFNSIPI
TINGKKHSNAHLPPGLWEECLQFEPIPQDFVRLWRIPYFKKRLESFFGQNRKAVMETDEV
TYLSKEELLELLRL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG