YALI0E32879g

Overview

Description weakly similar to uniprot|S3D098 Glarea lozoyensis GLAREA_01398 WD40 repeat-like protein
Locus type CDS
Locus tag YALI0E32879g

Location

Species Yarrowia lipolytica Positions 3914151..3916231
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2081 (nuc.)
Previous locus YALI0E32857g Next locus YALI0E32901g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32879g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32879gYALI0E32879g_mRNA-001YALI0E32879g_CDS-001

Nucleotide sequence

 

>YALI0E32879g
ATGTTTCTATTACCGCCCCCGCCGCCCATGCGAGGCCAACATGTCGGTCTCTACACCATG
GGCACCACGGTTGCCTCTCCCACCGCCGCCCAGCTCTACAGAGACCCCAACATTGATCCC
ATCGACGCTACATGTGTGCCTACCCCTGAAACGGTCGGTTTCACCGCCCCCGAGGGCACA
TACACCCCTATGGAGTGTGTTTATTTGGCCCCTCCACCTCCCCATCCTTCTGATCCCCCA
CCAGTGGTCGTCAACCCCCTGGCTCCCACAACAGCTTCTCCTCAGGCATTTTCGAACGGT
GTCAAACTCACCGTTTTTGCGTTCCAGGATAAAAACACCCCGCAAAAGGCCGCCCCAGTA
TCCAGCGGATCGCTGTTCAGCTTCTCCCCAGCCTCGGGATCAGGTTGGCTCCGTCGACCC
TCGCATTCCCTGGGCCCCGAACTCTCCAAGGTCGACTCCCGTGGAAGTGACAACAGCAAC
TCGACATCCATCTACGCGCAGTCGTCATCTGCGCAAGCCTCCACTAACGCCGTGTCCGTA
CCCATCAGTGTGCCCGGAAGCACTGTGAACGTTGACAATACTAACCCTTCTGCCTCCAGT
CTGGGCATGTTCCTCCGAAAAAAATCTGTCTCTTCCGAATGGGGCACCAACGTCGGAAGC
GTACAAACTGCCCAGGACTCGTCGTTCGAAGATGACTACGGTACCCCTCCCAGTAGCACC
GGTCTGGGTGCCAGCCCTGCCACCAACAACAAAAACAGCAAGCGAACTCGGCCGAAAAAC
TCGCTTGTCAAGAACAATTCGTCCTATCTCAGTCGTACCATTGTCAGAGAAGGTCTCACT
AAGCTGCTGTGTGAACGTCCTCTCGGAGAACTATTTGTGGTCACTAACATCAATCGGTCT
CTACAGTGGCTGGACTTGCAGGACTACCAGTCAGATGTACATCCTCAACGACACGAGGCT
CTGACCAAGATTCTCCTTACCCGAGCCCATCCTCTCTGCCACGATGTTAACCGAAAGACA
AAGTCTCTTGCAGGTTTCGATCTCATTGTGGGTTTCTCGTCTGGAGACATTCTGTGGATC
GATCTGGTCACTGGAAAGTACAACCGAATCAACAAGAACGGTGAGGTGTGCAAGGCCGCC
GTTGTGGACATCAAATGGCTTCCCAACTCCGACTCTCGATTTGTGGCCGCCCATGCTAAC
GGGTGGGTGGCTGTCTACGATAAGGACCGTGATGGAGGCATCTGCGAAGTTGCCCAATCT
TACGTCGAGAGCAAAAAGGATTACCGACATAAGCAGGGGTCTGTTGTAGACATTGAACAC
TGTCACGTGATCAAATCTCACACTGAGCAGAGCAAGCAGAACCCTATGGCTCTCTTTGCT
GTCTCGCCAAAGCCCTTGACCTCTATCGCCTTCTCCCCCATCTCTCACCGGACTCTGGCA
GTCACTGGACGAGATGGATACACTCGGCTGATCAACCTCATGACTGAACAGGCCACTGAC
GTGTTCCCCTCGTACTTTGGAGGCGTCATGTGCTGTGCATTCTCGCCCTGTGGCCGCTAT
TTGGCTACTGGAGGCCAAGATGACCTTGTTTCGTTGTACAGAGTCGACAGTACTTCTTCG
GGCCAATCAGCTCAGATTATGGCTCGACTTCAAGGCCACAACTCGTACGTCAGCCATGTT
GCCTTTGATTCTTACATCAGCGACCCTCGATCTATCCGTTTGGGTTCTGTTGGTCAGGAC
GGCTGTTTGCTTCTCTGGGACGTTGATGTCCACACTTCGACGGTTCGAAAGGGACGATCT
CGGTCTAACTCTGCCGCAACTTCTCTCGCCCCCAAGGCTGACCGGTATGGTACATTGATT
CATCCCTTCGTGTCCCGTCTGGAGCCCTCTGCTCAGCTGTCTCAGCCCGTAGTCAGTCTC
CCTGTCAAGGCTGCAAATAAGGAGTGTGAACCTCTGACGTATCTTGAGTTCCTGAGTGAT
CGAGTGATTGCTGCAGGCAAGGACGGACGAATCTGGACCTGGAAGCGACCTAATGTTTAA
TTAGTCTAACGATATAGTGATGATATTTTATGAAAGTGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32879g_CDS-001

Protein length: 680 aa.
Product: Conserved hypothetical protein

>YALI0E32879g_CDS-001 MFLLPPPPPMRGQHVGLYTMGTTVASPTAAQLYRDPNIDPIDATCVPTPETVGFTAPEGT
YTPMECVYLAPPPPHPSDPPPVVVNPLAPTTASPQAFSNGVKLTVFAFQDKNTPQKAAPV
SSGSLFSFSPASGSGWLRRPSHSLGPELSKVDSRGSDNSNSTSIYAQSSSAQASTNAVSV
PISVPGSTVNVDNTNPSASSLGMFLRKKSVSSEWGTNVGSVQTAQDSSFEDDYGTPPSST
GLGASPATNNKNSKRTRPKNSLVKNNSSYLSRTIVREGLTKLLCERPLGELFVVTNINRS
LQWLDLQDYQSDVHPQRHEALTKILLTRAHPLCHDVNRKTKSLAGFDLIVGFSSGDILWI
DLVTGKYNRINKNGEVCKAAVVDIKWLPNSDSRFVAAHANGWVAVYDKDRDGGICEVAQS
YVESKKDYRHKQGSVVDIEHCHVIKSHTEQSKQNPMALFAVSPKPLTSIAFSPISHRTLA
VTGRDGYTRLINLMTEQATDVFPSYFGGVMCCAFSPCGRYLATGGQDDLVSLYRVDSTSS
GQSAQIMARLQGHNSYVSHVAFDSYISDPRSIRLGSVGQDGCLLLWDVDVHTSTVRKGRS
RSNSAATSLAPKADRYGTLIHPFVSRLEPSAQLSQPVVSLPVKAANKECEPLTYLEFLSD
RVIAAGKDGRIWTWKRPNV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG