YALI0E32813g

Overview

Description similar to uniprot|Q02981 Saccharomyces cerevisiae YPL109c similarity to aminoglycoside acetyltransferase regulator from P. stuartii singleton
Locus type CDS
Locus tag YALI0E32813g

Location

Species Yarrowia lipolytica Positions 3893421..3895462
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2042 (nuc.)
Previous locus YALI0E32791g Next locus YALI0E32835g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32813g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32813gYALI0E32813g_mRNA-001YALI0E32813g_CDS-001

Nucleotide sequence

 

>YALI0E32813g
ATGTTTCGTTGTTGCTTGAGGACTGTTCCTCTGAGGGCAATGCTACGTCCTCGAGCGATC
CACTCCATGAGGCCCTCTTTCACCAACGCTCGTCAAGCCAACTTCCGAGTTGCTGGAATG
GCGACTGGTCTGGCGGCAGGCTTCGCAGTGGGCTGCTCCATGGTGCTGAACGACGCGCCG
CAAGAGAAAGATGACAAGAAACAGGACCTCACCAGAGAAGAAAAGTTCTACATCGAATCC
CAACAACAAACAGAAAGCAGAAAGCTCCCCGACTATGAAGACAGTTCCAACAAGCTGTAT
GTCTTCTTCAGACGGTTGTTAACCCGCCTGGAGGTCTGGATCTGGGACCCCATTGCCACG
ACCTTTCGATTCTTCTACCTTTCGATTCTCTTCGCCCCTGTTCTTCTTACTCTGCCCGTC
ATCCTCATCGGACCCCGGGACAAATCCAAAGACAACGAACGATACACTGCCATCTGGTGG
TATGGCTTCCTCACCAAGATGATGGAGCGTGCTGGAGCCTCTTTCATCAAGCTTGGTCAA
TGGGCTGCCTCTCGAACTGACATCTTCCCTCCTCAGCTCTGTGCCGAGATGAGCGACCTT
CATTCGAACAACAAGGCCCATTCTCTCAGAGTGACCAAAAAGACCCTGGAAGGTGCCTTT
GGCATGCCTTTTGAGGAAATCTTTGACGAGTTCGTGGACAAGCCTCTTGGAGTGGGTGCA
ATCGCCCAAGTTTACAAGGGTAAGCTGTCCCAGAAGGCGTTGAATTCCACGAAGCAGAAG
AAGGGCGAAAGAAGCCCATCTGGTTGGGTTGCCATCAAAGTCCTTCATCCCCGTGTTTCC
CAGATTGTCGAGCGCGACCTCAGTATCATGAGATTCTTTGCTAACATCATCAATGCAGTT
CCCACCATGGAGTGGCTCTCGCTGCCCGGAGAGGTTGAACAGTTTGCCGGTATGATGCGT
CTGCAGATGGACTTGCAGATTGAAGGTAAGAACTTGGAGGTTTTCAATAAGAACTTTCAA
GATAAGGCAGACATCCACTTCCCTCACGCATTCCTGGAATTCACTACCCGAGACGTTCTG
GTCGAAGAGTACATTGACGCTATCCCTGTTCACTTGTTCCTTGAGCGAGCCAAGGATGGT
GGTGGATTCGACAAGGAGATTGCTAACAAGGGTCTAGATGCGTTCTTACAGATGCTGCTC
ATTGATAATTTCATCCATGCTGATCTGCACCCCGGTAACATCTTCGTTCGACTCTACAAA
CCTGAGTCGATGATGCATCATCTTGGTTTCGGCGACCACAACAACGCCAATGAGGACTAC
ATTGAGATGCAGAAGGTGAACGATCACCTCAAGAGTCTCAAGCATGACCCCGCGGCGTGG
GACAAGGAGATTGAAAGACTCAAGGCTGATGGATACCATGCCCAGCTTTGTATGATTGAT
GCTGGTCTCGTTACTGAGCTCAACGAGCTGAACAGACGAAACTTCATTGATCTGTTCAAG
GCTCTGGCTGAGTTTGATGGCTACAAGGCTGGTGATCTTATGGTTCAGCGTTCTAGAACT
CCTGAGACCGTCATCGACCCTGAAACATATGCCCTTAAGGTCGGAAAGCTTGTTGCTCAG
ATGAAGAGCCGAACATTCAAGCTTGGAAACTTCAAGATTGGTGATCTCTTGACGCAGGTA
CTTGCCATGGTGCGGCAACACCACGTGCGAATGGAACCCGATTTTATCACAGTCATTCTC
TCCATTCTGCTATTAGAGGGCATCGGCCGACAGCTGAACCCTGACCTGGATCTCTTCAAG
AACGCTATTCCCGTTTTGCGAGAGCTCGGAACCCACTCTGGAGACGGACGAGCTCTTTTC
AACAACGAAGACATGATGTCTATGCTTAAGGTCTGGCTTGCCCTTGAGACTCGACAGTTC
ATCTCCGCCTCGGTCGAGGAAGTAAACCAGCAGGTCAAATACGACGGACTATGCCCCAAT
GTCTAAAAACATGATACACTGAGCACAGTATTTTTATATAGAGTAACTTTAAGCATGAAG
TT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32813g_CDS-001

Protein length: 662 aa.
Product: Conserved hypothetical protein

>YALI0E32813g_CDS-001 MFRCCLRTVPLRAMLRPRAIHSMRPSFTNARQANFRVAGMATGLAAGFAVGCSMVLNDAP
QEKDDKKQDLTREEKFYIESQQQTESRKLPDYEDSSNKLYVFFRRLLTRLEVWIWDPIAT
TFRFFYLSILFAPVLLTLPVILIGPRDKSKDNERYTAIWWYGFLTKMMERAGASFIKLGQ
WAASRTDIFPPQLCAEMSDLHSNNKAHSLRVTKKTLEGAFGMPFEEIFDEFVDKPLGVGA
IAQVYKGKLSQKALNSTKQKKGERSPSGWVAIKVLHPRVSQIVERDLSIMRFFANIINAV
PTMEWLSLPGEVEQFAGMMRLQMDLQIEGKNLEVFNKNFQDKADIHFPHAFLEFTTRDVL
VEEYIDAIPVHLFLERAKDGGGFDKEIANKGLDAFLQMLLIDNFIHADLHPGNIFVRLYK
PESMMHHLGFGDHNNANEDYIEMQKVNDHLKSLKHDPAAWDKEIERLKADGYHAQLCMID
AGLVTELNELNRRNFIDLFKALAEFDGYKAGDLMVQRSRTPETVIDPETYALKVGKLVAQ
MKSRTFKLGNFKIGDLLTQVLAMVRQHHVRMEPDFITVILSILLLEGIGRQLNPDLDLFK
NAIPVLRELGTHSGDGRALFNNEDMMSMLKVWLALETRQFISASVEEVNQQVKYDGLCPN
V*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG