YALI0E32197g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E32197g

Location

Species Yarrowia lipolytica Positions 3822161..3822850
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 690 (nuc.)
Previous locus YALI0E32175g Next locus YALI0E32208g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32197g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32197gYALI0E32197g_mRNA-001YALI0E32197g_CDS-001

Nucleotide sequence

 

>YALI0E32197g
ATGCTTGACACAACAGACACAACCTCCAAAACACAACCTCAAGACACAACCTCAAGACAC
AACCTCAGACACACACTACCAAAGCCTACAGCCATGACGGGTGTTCGGATTGATCAGGTG
GCGGACTTCATGGACCTCCGGGGCATGAAAAACAGCCTGGCCGTCTTCTACAGCACCTTC
AGTTTCACGCCCTACGAGAACGGAGATGTCATGATCGGATCTGCCAATGAGCCTCGAATA
GTCATGATTCCTCATGAGACTCAGACAGACGCTTTTCGTGCCGCTCTTGAACGCAAACTG
GCCACTCTTCCTCCTCCGCACTATGACAGGCCGCATCCTTTGGGCTCTGATCTACTGTTG
AGCAAGATGGCCCCAAAGATGAAAATCATGACTCGAGCGGAGTACATTCTATGGCAACTT
CGACGACTCAGTCAGGACTATAGTCACGTTCCGAACAGCCTGATGTTAATGCCATGTGAG
ATTCACCAGAAGGAGGTGTCTGCTGGAGTCACCGATGTCAAGAGTAAGACAACAGAGGTC
AAGACTAAGAAGAAGCGGCGCAAGAAGAAAAAGGGAAAGCGAGTCGATACCGAGGCCAGT
ACGGACGCTACTTGTAGCACCCCGCCTTCATCTCGGGCAACATCAGGTTGGTCAACGGTG
CCTAACACGCCAACGAGTAGTCGAAGGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32197g_CDS-001

Protein length: 230 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E32197g_CDS-001 MLDTTDTTSKTQPQDTTSRHNLRHTLPKPTAMTGVRIDQVADFMDLRGMKNSLAVFYSTF
SFTPYENGDVMIGSANEPRIVMIPHETQTDAFRAALERKLATLPPPHYDRPHPLGSDLLL
SKMAPKMKIMTRAEYILWQLRRLSQDYSHVPNSLMLMPCEIHQKEVSAGVTDVKSKTTEV
KTKKKRRKKKKGKRVDTEASTDATCSTPPSSRATSGWSTVPNTPTSSRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG