YALI0E32043g

Overview

Description similar to uniprot|Q05946 Saccharomyces cerevisiae YLR222c UTP13
Locus type CDS
Locus tag YALI0E32043g

Location

Species Yarrowia lipolytica Positions 3805471..3807888
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2418 (nuc.)
Previous locus YALI0E32035g Next locus YALI0E32065g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32043g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32043gYALI0E32043g_mRNA-001YALI0E32043g_CDS-001

Nucleotide sequence

 

>YALI0E32043g
ATGGAAACGACGGAAAAGACTGCGTTCGAAGCCGTATCCGTGGAGCCTTTCTACACCGGC
GGCAAGACCTCTCTCGCCGACGACGGGTACACCCTGGCCACCTCTTTTGGAGAGGACGTG
GTGGTGACCAACATCAAAACTGGAGAGGAAATCTGCCGAATCGAGGGCGATAGTGAGATT
CTGACGACTCTGGAAATAAGTCCCGATGCCCAATACCTCGTCACATGCTCCCGATCTCTG
ACAATGCGCACATACCGAATCCCCAGTGGAGAACTGGTTCGATCAGCCCGGGCCCATGAC
GCCCCAGTGATTGTCATGGCTATCGACAGCTCATCGAGTCTGGTGGCGACCGGAGGAGCC
GAGGGAACCGTCAAGGTGTGGGATCTGGAGCGGGGATTTGTGACTCACAATCTCAAGGGC
CATGGAGGAGTGGTTTCTGCATTGAAGTTTTTCGGCGAACAGGGCGGCTCAGTGTGGCGC
CTGGCGTCCGGAGCGGACGACTGCAAGATCCGAGTTTGGGATCTCGTGAGCCGAAAGTGT
CTCAAGGTGCTGGATTCGCATAACTCGGTCATTCGAGGTCTGTCCTGGAGCTCCGACGGT
GGCATTCTTGTGTCTGGAGGCCGAGACAAGATCGTCAACGTGTGGGACGCCAACAAGTTC
AAGCTGGTGCGAACCATCCCCGTGGGTGAGAGTATCGAGACAGCCGGTATCCTGAATGGC
GAGGGTCTTCGAATCTATACTGGTGGCGAGATGGGAGTTGTGAAGATCTGGAACGGTCAG
ACTTCTGCTCTGATTGCTGCCCAGGTCCAGCCTGCAGTGCACAACAAGGAAAACGAGCGA
GTGGGAGTGGTGGACATTCTGTATAAGACCGACAAGCTTGTGTCTGTGCTGTCAGACCAG
ACTTTTGTGGAGCTGGACGACGACCTAAAGGAGGTGCGACGTATTGTGGGTTTCCATGAT
CAGATCATCGATATGACTTATGTTGGCGAAGACGAGTCCAAGCTGGCGGTGGTCACCAAC
GCGCCCGACATTCGAATCCAGACCGTTGGAGGAATCGAAACCAACGTTCTGACTGGACAT
AGAGATAACGTCATTGCCGTGGACCGATCGTTTGACGGTACCTGGCTGGCTTCCTCTGGA
AAGGATCACGAGGCTAGAATCTGGCACGTGCCCACTCTGACCTGCTTTGCTGTCTGCACC
GGTCATGCTGGTTCTGTGGGAGGTGTTGCTCTTCCTAGACTTCCTCTTGAGGGTCGACCT
CCTCAGTTCCTCATTACCGGCTCGCAAGATCTGACCATCAAGAAGTGGAACATTGCCAAG
GACGGTACTGCGAAGGCCGAGTACACCCGAAAGGCCCACGAGAAGGATATCAATGCTCTG
GACGTGTCTCCTAACGATAGACTGTTTGCTACGGCTTCTCAGGACAGAACTGCAAAGGTG
TGGGACATGAACTCGGGTGAGGCTGTGGGAGTGCTGCGAGGACACAAGCGAGGCGTCTGG
TCTATCAAGTTCAACCCCTACGAGAAACAGATTGTAACTGGATCGGGAGACAAGACCGTC
AAGGTGTGGTCTCTGAACGACTTTTCGTGCCTGCGAACATTTGAAGGCCATACCAACTCG
GTTCTGCGAACCGTGTGGACTTCTCTGGGCTCCCAGATTGTCTCCTCTGGAGGAGACGGA
CTCATCAAGGTATGGACTTATGCCTCTGGAGAATGTGCTGTCACTTTGGACAACCATGAA
GACAAGGTGTGGTCTCTGGCTGTTCGAGGCTCCGATGACGGTGCCCAGATGGTCTCTGGA
GACGGAGAGGGAACCATTACTGTGTGGAAGGATATCTCCGACGAGGAGAAGGCTGCCAAG
AAGGCTGCTGCCGAGCTTCAGGTGGAGCAGGAGCAGCAGCTGGCAAACTACGTGCGGTCC
AAGGACTGGGAGAATGCTATTCTGCTTGCTCTGACTCTGAACCAGCCCTACAAGCTTTTC
TGTCTGTTCCGAGACGTGCTTGCTGATCGCCAGGACGAGGACTCCATCATGGGTCTGACT
AAGGTCGACAATGTGATTGCTGGACTCAATGTCGAGCAACTGGAGCTTCTGATCAAGCGA
GTCCGAGACTGGAACACGAATGCTCGATCGTCGGTGGTGGCTCAGCGGGTCATGAACTGC
ATTCTGGTTAACCACTCGGTTGACAAGCTCAGCCAGGTGCCCAAGATTTCCACCATGACA
GACGCTCTCATTCCTTACTCGGAGCGACACTTTAACCGGGTCGATGAGATGTACGACGAG
AGCTATCTGCTAGACTACGCTCTGAATGAGATGGACTTCCTGGACACTCCTCAGGTTGTG
TAGGATGGAAATGGGGGCGTTGTGAGGGACTAGGGACGGGTTATATAGGCATACCAATAG
ATATTGACATTATTGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32043g_CDS-001

Protein length: 781 aa.
Product: Nucleolar protein, putative

>YALI0E32043g_CDS-001 METTEKTAFEAVSVEPFYTGGKTSLADDGYTLATSFGEDVVVTNIKTGEEICRIEGDSEI
LTTLEISPDAQYLVTCSRSLTMRTYRIPSGELVRSARAHDAPVIVMAIDSSSSLVATGGA
EGTVKVWDLERGFVTHNLKGHGGVVSALKFFGEQGGSVWRLASGADDCKIRVWDLVSRKC
LKVLDSHNSVIRGLSWSSDGGILVSGGRDKIVNVWDANKFKLVRTIPVGESIETAGILNG
EGLRIYTGGEMGVVKIWNGQTSALIAAQVQPAVHNKENERVGVVDILYKTDKLVSVLSDQ
TFVELDDDLKEVRRIVGFHDQIIDMTYVGEDESKLAVVTNAPDIRIQTVGGIETNVLTGH
RDNVIAVDRSFDGTWLASSGKDHEARIWHVPTLTCFAVCTGHAGSVGGVALPRLPLEGRP
PQFLITGSQDLTIKKWNIAKDGTAKAEYTRKAHEKDINALDVSPNDRLFATASQDRTAKV
WDMNSGEAVGVLRGHKRGVWSIKFNPYEKQIVTGSGDKTVKVWSLNDFSCLRTFEGHTNS
VLRTVWTSLGSQIVSSGGDGLIKVWTYASGECAVTLDNHEDKVWSLAVRGSDDGAQMVSG
DGEGTITVWKDISDEEKAAKKAAAELQVEQEQQLANYVRSKDWENAILLALTLNQPYKLF
CLFRDVLADRQDEDSIMGLTKVDNVIAGLNVEQLELLIKRVRDWNTNARSSVVAQRVMNC
ILVNHSVDKLSQVPKISTMTDALIPYSERHFNRVDEMYDESYLLDYALNEMDFLDTPQVV
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG