YALI0E31757g

Overview

Description weakly similar to uniprot|Q8X0W7 Neurospora crassa 123A4.250 Related to NsdD protein
Locus type CDS
Locus tag YALI0E31757g

Location

Species Yarrowia lipolytica Positions 3762727..3764037
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1311 (nuc.)
Previous locus YALI0E31735g Next locus YALI0E31766g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31757g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31757gYALI0E31757g_mRNA-001YALI0E31757g_CDS-001

Nucleotide sequence

 

>YALI0E31757g
ATGATTGCTTCGGCCACTCCTCGACCCGAACGTTACGTCCTGTCGCCCGTGTCGCCTCAT
GCCAAGGTCGAAATGTCCAAAAATGACCCTTCTTCATTCTACAAATCCGAGGTGCGACTT
CCGCCAATGCGGGTTCTGGACACCCAGCCATCCCAGCTGCCAGTGAACATTCCGCCATTG
AACTATACCCCGTTTGACAGTGCCAGTGCGAGTGTCAGTGCAAACGCCAACTCAAACGCC
AATGTAAACGCCAATGGAAACGCCAGTGTTGGAAACACCCCCAATCCTGTTCCCCACAGT
CTGCCCCCACCGGCTCCAACACACTCCATGTCTTCCACGCCCATCTCCACCCCGGCGCCC
ATTTCTACCACTCCTATTCCTCATCTTCACTCGCAGGCTCCCACTCCACAGCCTGTTCAG
CAGCAGTCTGTTCAATCTGTTCAACCTGTTCAACCTGTTCAGCACCAGCACCAGCACCAG
CACCAGCACCAGCACCAGCCCCAACATGTCCAGCATATGCCGCTGAACCAACCTCCTCTT
CTTCACCAACCAACTCCCCTCCCCCCTCCCCCCCAGCATAATACAACCCCCCAGCCTTAT
GGCCACCCCATTCCTCCCCCCATGCCCATGACCCACCCCATGATGCCTCCCTACTACACG
CCCTTCTCGGGCCAGGACTTCAAGCGCAAGACGTTCGAGTCCAAGGACACGGCCTCCCAC
ATGTACCAGATGATCTCGCAACTGGAGACCTTTGTGCAGAACCACGGTGGAGACATGCGG
AACATGGCCCACGCCGCCTCGTCCCCACACTCACCTCTGCCCTCCATCGACGCACTCAAC
GCCATGATCCTGCGGCTCAGAAGCTGCTCGGCCATCTTTGACGAGTGGAGAGACAATGTG
GTGGCTATCCACCAGGCCGCCGCCTCGTCCCAGACCACAAATGCCCAGTACCCTCCCAAA
ACCACCCCTCCCGCCTCGCCGCTCTTCATTAACACAAACACCAAGCGAAAGCGCAAACGA
TCTCGATCCGACGCCTCTACCACGGTCTGTAGAGGCTGTGGAACCACCGAGACTCCAGAG
TGGAGAAAGGGTCCCGAGGGAGCACGAACCCTGTGCAATGCCTGTGGACTATACCATGCC
AAGCTGGCCAAGCGAAAAGGTATCAATGTTGCCGGAGAAGCCATTCGTCAGAAGCGAATG
CGAACTAATTTGAGCGAGTAGGTCGGCACACGGAAGACTTTGTCACGACACCCGCAAGAG
ACACTAGACTGTCATGTATTTATTGTATAATAGCATCATCATTGAGCATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31757g_CDS-001

Protein length: 407 aa.
Product: Conserved hypothetical protein

>YALI0E31757g_CDS-001 MIASATPRPERYVLSPVSPHAKVEMSKNDPSSFYKSEVRLPPMRVLDTQPSQLPVNIPPL
NYTPFDSASASVSANANSNANVNANGNASVGNTPNPVPHSLPPPAPTHSMSSTPISTPAP
ISTTPIPHLHSQAPTPQPVQQQSVQSVQPVQPVQHQHQHQHQHQHQPQHVQHMPLNQPPL
LHQPTPLPPPPQHNTTPQPYGHPIPPPMPMTHPMMPPYYTPFSGQDFKRKTFESKDTASH
MYQMISQLETFVQNHGGDMRNMAHAASSPHSPLPSIDALNAMILRLRSCSAIFDEWRDNV
VAIHQAAASSQTTNAQYPPKTTPPASPLFINTNTKRKRKRSRSDASTTVCRGCGTTETPE
WRKGPEGARTLCNACGLYHAKLAKRKGINVAGEAIRQKRMRTNLSE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG