YALI0E31449g

Overview

Description similar to uniprot|Q12464 Saccharomyces cerevisiae YPL235W RVB2 RUVB-like protein
Locus type CDS
Locus tag YALI0E31449g

Location

Species Yarrowia lipolytica Positions 3709853..3711491
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1639 (nuc.)
Previous locus YALI0E31438g Next locus YALI0E31471g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31449g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31449gYALI0E31449g_mRNA-001YALI0E31449g_CDS-001

Nucleotide sequence

 

>YALI0E31449g
ACCAACTTTTTCTATCACAACTAAACATCACAATGGTGAGTATTTGGATGAGCGGGAGGA
GTGATGGAGCGAGTTGCAGACAAAGAGACATTAACGAATGCGTTTATATCCTCTTATGGC
TCTGAAAACTCACGATTCAACCCTTTGCTTCTACTTTTGAAGGTCTTCTCTAACTCAGTC
TATCGCCACAGTCGCACAAGCAAAAGATGTGCGGGGCCTCAATCTGGTGGCCGCACACTC
ACACATCACCGGTCTGGGTCTGGAGCCCAATTCGCTGACTCCCAAGGAAAACGCCCAGGG
AATGGTGGGCCAGGTCAAGGCTCGAAGAGCAGCAGCAGTGGTGCTTCAGATGATTAAGGA
CGGCAAGATTGCCGGTCGGTCTGTGCTTCTCGCCGGTCCTCCTTCCACCGGAAAGACCGC
CATTGCCATGGGTATTTCTCAGTCTCTTGGCTCTGATGTTCCTTTCACTTCTTTGGCTGG
TTCCGAAATCTACTCTCTGGAGCTGTCCAAGACTGAGGCTCTCAACCAGGCCTTCCGAAA
GTCCATTGGCGTGCGAATCAAGGAGACCACAGACATCATCGAGGGAGAGGTGGTGGAGAT
CCAAATCGACCGAAGTCTGAGTGGAGGACACAAGCAGGGTAAGCTGACCATCAAAACAAC
AGACATGGAGACTATCTATGACCTGGGACACAAGATGATCGACTCGCTGAGCAACGAAAA
GGTGACTGCCGGCGACGTCATTTCCATCGACAAGGCATCTGGCCGAATCACCAAGCTCGG
ACGATCTTTTGCTCGAGCTCGAGACTACGATGCTCTGGGAGCTGACACCAAGTTTGTGCA
GTGTCCCGAGGGCGAGCTGCAGCAGCGAAAGGAGGTGATCCACACTGTATCCCTGCACGA
GATCGATGTCATCAACTCTCGATCCCAGGGATTCCTGGCTCTGTTTTCTGGAGATACCGG
AGAGATCCGACCTGAGGTGCGAGAGCAGATCAACACCAAGGTTGCCGAGTGGAAGGAAGA
GGGTAAGGCCGAGATTGTGCCTGGTGTCCTGTTCATTGATGAGGTCCACATGCTCGACAT
GGAGTGTTTCTCGTTCATCAACAGAGCTCTGGAGGACGATATGGCTCCCATTGTCATCAT
GGCCACCAATCGAGGTCAGTCTACCACCAGAGGAACCGACTACAAGTCTCCTCACGGACT
GCCCGTCGATCTCCTCGATCGAGTCATTATTATCCCCACTTCTCCCTACTCCCCTGACGA
GGTGAAGCAGATTCTGCAGATCCGAGCCAACGAGGAGGAGGTTGAACTGAGCCCCGAGGC
TCTGGAGATTCTGACTTCCATCGGAGCCGATACCTCTCTCCGATACGGATCCAACCTGAT
TTCTGTGTCTCACATGCTGGCCCAGAAGCGAAAGGCCAGCAGTGTGGGCTTAGAGGACGT
GAAGCGAGCATACTCTCTGTTTTTGGATACCGCTCGATCCGTGCAGTTTCTGTCTTCTTC
TAACAACTACGTTGGTGAGGACGGAACCGCTAAGCTGGGTGAGCGAGAGAAGGATGCCAT
GGACACCTCGGCTTAAGGGTATAGGTAGATGTATGTATTGTATTGATATATTTAATTAGA
GCTTGTGTTGTAGCCCTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31449g_CDS-001

Protein length: 467 aa.
Product: ATP-dependent DNA helicase, also known as reptin, putative

>YALI0E31449g_CDS-001 MSIATVAQAKDVRGLNLVAAHSHITGLGLEPNSLTPKENAQGMVGQVKARRAAAVVLQMI
KDGKIAGRSVLLAGPPSTGKTAIAMGISQSLGSDVPFTSLAGSEIYSLELSKTEALNQAF
RKSIGVRIKETTDIIEGEVVEIQIDRSLSGGHKQGKLTIKTTDMETIYDLGHKMIDSLSN
EKVTAGDVISIDKASGRITKLGRSFARARDYDALGADTKFVQCPEGELQQRKEVIHTVSL
HEIDVINSRSQGFLALFSGDTGEIRPEVREQINTKVAEWKEEGKAEIVPGVLFIDEVHML
DMECFSFINRALEDDMAPIVIMATNRGQSTTRGTDYKSPHGLPVDLLDRVIIIPTSPYSP
DEVKQILQIRANEEEVELSPEALEILTSIGADTSLRYGSNLISVSHMLAQKRKASSVGLE
DVKRAYSLFLDTARSVQFLSSSNNYVGEDGTAKLGEREKDAMDTSA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG