YALI0E31339g

Overview

Description weakly similar to uniprot|Q9P7E1 Schizosaccharomyces pombe Zf-C3HC4 ring finger protein
Locus type CDS
Locus tag YALI0E31339g

Location

Species Yarrowia lipolytica Positions 3692829..3694524
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1696 (nuc.)
Previous locus YALI0E31317g Next locus YALI0E31361g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31339g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31339gYALI0E31339g_mRNA-001YALI0E31339g_CDS-001

Nucleotide sequence

 

>YALI0E31339g
ATGGGCCAGTCATCGTCACGTGACTCGACGTCGTCGTCTAACCCCAGCGGTGCCCCTCAA
CAACCACATCGGAATCGTCTGGTGCAGCGGCTCCAGACTCATCTGCGCCGTCGACGTCCG
GAGGCCCCCGCTGCCACCATGTTTGTACCGCAACGCCGAAGGCGATCAGCCACAGATTCC
GTCCGCAGCGAACGACGCAAACGTAGAGTTGAGGACGACTCTGAGGTGGCGGAAACACAG
GCAGCTGTAGGAACAGCAACAGGGGCTACGGCAACAACGACGAATACGGAAACGTCGAGC
TCCCCACCTGGTGGAACTCCCCAGGCTGCTGCATCTACTTTAGGAGAGGCTTCCATCGAT
GCCTCAGAAACACAACCCTTGCTGGAGAACATTCTGGAGGAACCCGAGCCTGCATCCACA
CGGAATTCGGGTGTGCCGACGGGCGGAATTCCAGGCATGGACATTCCAGGTATGTCGAAT
GAACGGCAGCCACGTAATCAGTCGGTCATGTTGTCTCGATTGTTGTTTCTGGCCTCTGCC
ATGACCGCATCTTCGCTTGTGGGCACCGAGTTTGGCTTCCAGAACGGCGGAGGTACCGGA
TCATCCTCAGACGACTTTGACCGGTTCCTCTCTGGACTTTCGCGAGGTCTGCTCTCACCT
GAGATCACTGCTCGTGAACCCTCTGGGGCGGAAGGTGTTCGACCCCTCAACTACTTTCGA
ATGTTTAGATTCCCTCCGACTGAAGGATCCACGTTTGTTCCTGTGCTTGTGGTCGGAATT
AGATCTTCGGAAGATAACGGACAGGGACCCAATGCGGAGATCACCACTGATTCCATGCCG
TTTTTCGAAGCAGCCACCTCCAGACCCATTCGTCTGAGTGAACCCACCGACACAGTAGAG
TATAACCCTCTTCGCTCGCGCTACGAGCGTGGTAGATCTATCTTGGATCAATTCATGAGC
GACTTTGGCCCATCATTCAACAACCCAGATAGACAGGGTAGCACAGACTCGTTGACGGAA
ATGCCCGACTCGGCATCCACTTACCATACCCCTCTGGCGAGCACGGAACAAGTCGACGAT
GCCGGTTCTGCATCTGCTTCCGCCATTTCTCCTGCTGTGGCTCCTCATCCTCTCATCCCT
GCCACTTCTCCGGCTTCACAGACTGCCCCACCTCTGCCTAGCCTCCCTTCACTGCCTCCT
CCGACTGGTGACAACGCCAATGAACCTCGGAATACTCGAGAGTCGCTACGAGAAGCCATC
CCCGAGCGCCCCCTGAGACAGTCATGGATCGTCTATGTCTTTGGAGGCACGTACCCTGAA
GACCATCCCATTCTCAATGCGGCTTCTCTGTTCACAGATGAACCTACCATGGAGGATCTG
TCCCTGTTGGAAAGGCATCTGAGCCCCATGAAGAACCATCTGGCTACCCAGGAGGACGTG
GAGCAGGCTGGAGGATTGTCGACGGTGAAAGAGTTCATCGAGGGCGAAAAATGCCCTATT
TGCATGACGGATTACGAAAAGGGCGACGTGTGTCGGCAGCTCAATAAGTGCCATCACGAG
TTCCACAAGGACTGTGTGGATCATTGGCTCCTGACTGGATGCAACTCGTGTCCCATGTGT
CGAGGCGAGGGAGTTGCCAGGGCTTAAGTAGGGGTAGCATTTAGACATTACTTAATGTAA
CGAATTATGAGTGAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31339g_CDS-001

Protein length: 549 aa.
Product: Conserved hypothetical protein

>YALI0E31339g_CDS-001 MGQSSSRDSTSSSNPSGAPQQPHRNRLVQRLQTHLRRRRPEAPAATMFVPQRRRRSATDS
VRSERRKRRVEDDSEVAETQAAVGTATGATATTTNTETSSSPPGGTPQAAASTLGEASID
ASETQPLLENILEEPEPASTRNSGVPTGGIPGMDIPGMSNERQPRNQSVMLSRLLFLASA
MTASSLVGTEFGFQNGGGTGSSSDDFDRFLSGLSRGLLSPEITAREPSGAEGVRPLNYFR
MFRFPPTEGSTFVPVLVVGIRSSEDNGQGPNAEITTDSMPFFEAATSRPIRLSEPTDTVE
YNPLRSRYERGRSILDQFMSDFGPSFNNPDRQGSTDSLTEMPDSASTYHTPLASTEQVDD
AGSASASAISPAVAPHPLIPATSPASQTAPPLPSLPSLPPPTGDNANEPRNTRESLREAI
PERPLRQSWIVYVFGGTYPEDHPILNAASLFTDEPTMEDLSLLERHLSPMKNHLATQEDV
EQAGGLSTVKEFIEGEKCPICMTDYEKGDVCRQLNKCHHEFHKDCVDHWLLTGCNSCPMC
RGEGVARA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG