YALI0E31262g

Overview

Description weakly similar to uniprot|P53096 Saccharomyces cerevisiae YGL194c HOS2 putative histone deacetylase
Locus type CDS
Locus tag YALI0E31262g

Location

Species Yarrowia lipolytica Positions 3684919..3686249
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1331 (nuc.)
Previous locus YALI0E31240g Next locus YALI0E31273g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31262g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31262gYALI0E31262g_mRNA-001YALI0E31262g_CDS-001

Nucleotide sequence

 

>YALI0E31262g
ATGCCAGGAATTTGCATTCATCCATTGGCCAGTAAAGTATGTTCTGGGAGACCCTCCAAT
GAAGGCCGGGCTGCTCTGGTCGACTCATTGTTGGTGGCCCTTCAATTGCACAAGTCATAC
AAGCTGATACCCATAACCCCTGCCACAGCCGCTGAACTTCAGAGATACCACAGTCTGGAG
TATGTTTCGGCGGTGTTGAAGAAGGGTCAAAGCGAAAAGACGTTGGACAAGATGGGACTT
ATTCACGACTGCCCCATCTTTCCTGGTCTTGACGCGTATGTCAAACTTGTTGCTGGTTCT
ACATTGAGTTGTGCGAGGCAACTTATGTCTGGACAACACCAACTGTGCATCAACTGGTAT
GGAGGAAGACATCATGGTAAGCGGTCGGCTGCATCTGGGTTCTGCTATGTCAATGATGTG
GTTCTGGGCATCCAGGAGATGCGGAAGCAGTATCAGAAGATTATGTATATTGATGTTGAT
CTTCACCATGGCGACGCAGTCAGTGCAGCCTTTCTCCACAGCAAGAATGTTCTCTGTGTC
TCCTTACATCATTACGATACAGGATTTTTTCCTGGTACAGGTGCACTTTCTGACTGTGGG
TCTGGCCCTGGCGAGTATCATACTGCCAATGTGCCTTTGAGAAAGGGGTTTGGAGACCAG
TCTCTGGACCGAGTGTTCCATAGTATTGTTGAAGGATACTATGAGGCCTATCAGCCTACT
GCGGTGGTCCTGTTACTTGGATGTGATGGACTGGCTACTGATGAACATAAAAAATGGAAC
CTGAGTGTTCCTGGTCTGGGTGAGATTGTTCGCAAGGTCGCTTCGTGGAAGAAGCCCACT
CTGGTTTTAGGGGGAGGAGGGTACAATCACACAGATACTGCGCGATGCTGGACCTACTCG
ACGGCTGTATGTTCGGGTATGACGAAAGAGGAGATCTTGGCTTTAGAACTACCTTCAAAG
CTGTCAGAGAAGCATCTTGTACAGTTTGAGACGGACGGATACACGCTATGGAACGACGAG
AACCTCAGGGGCCGTACCATGGTGGACGAAAATGACGACGAGTATTTGAAAGAGTTAGAG
AGCACTCATCAGGAGAGGATTGGTAAACTGAGACCCGCTATAGCTACAGAATAAGTGCTT
CCATAGGTTCTGGTCTCATTTTGCACAATTACTCGTGACGACCTTACAACACGATAAACC
GTACCTATTAATCGCCGCACGGCCCACTGGGAGTCATCTCGCCCTCAATGTCGTTTGAAA
AAAAGATGAAAAAAAAATTGATAAATTTGATTTTATTCATTTATATACTCAGCTACTTGT
GTTCATCTCTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31262g_CDS-001

Protein length: 378 aa.
Product: Conserved hypothetical protein

>YALI0E31262g_CDS-001 MPGICIHPLASKVCSGRPSNEGRAALVDSLLVALQLHKSYKLIPITPATAAELQRYHSLE
YVSAVLKKGQSEKTLDKMGLIHDCPIFPGLDAYVKLVAGSTLSCARQLMSGQHQLCINWY
GGRHHGKRSAASGFCYVNDVVLGIQEMRKQYQKIMYIDVDLHHGDAVSAAFLHSKNVLCV
SLHHYDTGFFPGTGALSDCGSGPGEYHTANVPLRKGFGDQSLDRVFHSIVEGYYEAYQPT
AVVLLLGCDGLATDEHKKWNLSVPGLGEIVRKVASWKKPTLVLGGGGYNHTDTARCWTYS
TAVCSGMTKEEILALELPSKLSEKHLVQFETDGYTLWNDENLRGRTMVDENDDEYLKELE
STHQERIGKLRPAIATE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG