YALI0E30789g

Overview

Description weakly similar to uniprot|C5G6K7 Ajellomyces dermatitidis C2H2 finger domain-containing protein
Locus type CDS
Locus tag YALI0E30789g

Location

Species Yarrowia lipolytica Positions 3619844..3622712
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2869 (nuc.)
Previous locus YALI0E30767g Next locus YALI0E30811g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30789g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30789gYALI0E30789g_mRNA-001YALI0E30789g_CDS-001

Nucleotide sequence

 

>YALI0E30789g
ATGAACGCTCCAATCAAAAAATACAGATGCACGTTTTGCGACCGGGCCTTCTCGCGGTCC
GAGCATCGTACTCGCCACGAGCGGAGCCACACCCAGGAGCGGCCGTTCCAGTGCACGAAG
TGCACCTCGAGCTTTGTACGACGAGATCTGCTGCTTCGACACGACCGAACAGTGCACAAT
GAGAACAAGGTGAAGAAGGAGGATCGAAGGAAGTCCTCAGTTAGTGGGCTTCAGCAAATG
TCCGTTCAACAGGGTCAGGTAGGCCAGGTGGCCCAGCAGGTTGCCACGCAGCAGCAGCCA
CATCAACAGCCACCGCCACCACCACCACAACAGTCTCTAGGTCAACCGATGCAGCCCCAG
CTCCAACAGTCAATCATACCTGAACCCCAACAGCATCCACACCCACACGCGCAGCAGTTA
CAACACCAGCAACTGCCGCCAAACCACAATGGTATCCAATCTCATCTACACAACAGCAAC
AACAACAATGAAAAGCCTGAGCCTCCACTTCGACACGACCCAGCTATGAACTCGCCAGCA
CACACGCAACACTCTCCAGTAGACGTCAAACAACAGCCCGGAAAAGTGGACATGTCCATG
TTTGGAAACTTCAACACCAGCTCGCCTAACACACAGGACAAGGAATCGCTAAGCACGCTG
GCGGAAGCTGCGGGACGCGAGTTTGAGTACGAGTATCCACACAGATACCCGTCTCCTCTC
AACTACGACATGCTGTACGACCAGGAGCTGTCTGCGGCAAATCTCATCACCGATCTGGGC
CGCAAAAAGAACGTCAACATTCCAGGGATCGACAACATCAACAATGCCATTTTCGGAGAG
GCTCAGCATCGAGACGGATCCAACGGAGAGCATCCACACCAACAGCACGTGACGTCCATG
CATGTGAGAAGTGCCAGTGAAACGTTTGGGATGAAGACGGACCCCATTTCTGCCCAGCCT
TCGCCTCCTTTATCAGCCAGTGCGGCAACCACAGGAGCGTCTGCTGGAGTAGGAGGTGGA
ACTGGAGTAGGAGGAGGGACTGGAGTCCCAGGAACAGTGGCAGTAGCAACAGGAGCACCA
TCAGCATCAACAAGCGGTCACCCACCACCACAAACCCCCCCTGCTCCTATTGTCATCCCC
CAGTTTGCACCTCATTCGCCTCCTCTGTCGACACTCCTGTCGGCAGTGTCTCAGTACGAA
ATCAAAAAGAGCGGGCTGCGGTTTCTGCCAAGTAAAGGCCAGCTTAACAGATACCTGTCT
GTGTACTTCACATGCTATCATATGACGACTCCCATTATCCATCCCCAGTCGTTCAACCCA
CAAACGGCCTCCCCAGCTCTTTTGTTTGCAGTGTGTGCCATGGGAGCTCTGTTTGCCTCT
GAAATCGAAATGTCCAAAAAACTAAACGATCTCAGTTGTTCGTTGAGACGCACTGTTTTC
GAACAGAGTGAAATGTCATGGGCCAGTCCCGTGCCTATTTGGGCAACCCAAACCCTGCTC
ATCAACGTCTCGTACGAAATGCGAGTTGGTGATGAGCCCAGTCTGAATTTCGTCGAAGGC
ACAAAGACCCTGCTTTCTAACCTCGTTACTCAGCGAGTAGTGGAGGTGGAAAACCTGGAG
TTTGGGTGGAGCAACTGGATCATGCAGGAGTCGTCCAGACGTACGTATTTCGCCGTCTTT
GTACTATACGGTACAATGACGTGCTTGTTCAACCATGGGCCAGCCATCTGGAACGCCAAT
GTGCGTCCCAATCTCACTTTGCCGTGCTCAGAGTCGCTGTGGAACGCCTCGTTTTCGTCC
GAGCAGGAGTGGCTGCAGGCTTATTCGCAGACTGTACCTCCCCAAACCTTCAGATCGAGT
CTGGAGGCTCTTTGTGGCATTGGAGACACGAGTTCGAGTCATTATGGGCTTCGAATTCTC
GGTACAGCTCTGTTTTTCGAAGTTTGGGAACTGAAGAAACGGGAAGGTGCCAACAACACC
AGCAGAGATGGAAGTGGCGAGTTTTCTCAAAATGGATCTTATACGGGCCATCTAGGTCGA
GCGCTGTTGAAATGGCAACATTGCTGCAAACAGTTGCCCCCTACAGTCTCTGGAACAGTT
GATTTGTTTGCCAGTGAGCGCCTGATGATCATGATTCGAGCCATTATCGAGTCCTCCATC
AACCCCTCTACTGTTTCTTCCGTGTCTCTCTTCCGTGCCCATCCCATGATTCTCGAGGGT
CATATTCTCACAATTTTGTCCTCGATCAAGCTCCACTCGCCCCCTCGTCAAACCCTCAGC
CTAGCTACTTTTGAGCTGTCTCACTGCGAAGAGCTGATGGTGACCGAGACGAAGATCATC
GAAAAGTGCTTTGAGCTGTTTCACGTGCCTCTTCTCTGTGGATCTCAGATCTTCCAGTCC
TTCATGCTCAAGCCTCTCACCTTTGGTATGATCGACGAGAACATTGTCTCGACTTTTGAG
ATCTGTCTGGTGTTCATCGTTTGGATCGATTCCATTGAAAAGCGAATTGGAAGAGACCTC
AGCACACGTGAGCTGATACTATGGAACACTGTGCAGACGAGTTTGATTGATTCTGGAATC
GAGCTCAGCTGCCATGAGCTTGCCAAGCGTCATGGAGAGCCTAACAGAGTGTCGGACATG
CTGACTTACTCTTACGCTGGAGGCTTTGCATACTTTTGGGCGGATGTTCTGTCAGCTCTA
GACACCTGGGGAATGGCCAAGGTGCTGTCCAAGAGTTTGTGCAGAATTGGAAAGGGTCTC
ACAGAGCGCAGTGTTGAGAGACGACGTAGCAGCACTGGAACGTGACGTATTTGACGTGAT
GCAGAGAAGATGTAAATTAGCCACCTAATGAAGATGCATGACTGTAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30789g_CDS-001

Protein length: 935 aa.
Product: Conserved hypothetical protein

>YALI0E30789g_CDS-001 MNAPIKKYRCTFCDRAFSRSEHRTRHERSHTQERPFQCTKCTSSFVRRDLLLRHDRTVHN
ENKVKKEDRRKSSVSGLQQMSVQQGQVGQVAQQVATQQQPHQQPPPPPPQQSLGQPMQPQ
LQQSIIPEPQQHPHPHAQQLQHQQLPPNHNGIQSHLHNSNNNNEKPEPPLRHDPAMNSPA
HTQHSPVDVKQQPGKVDMSMFGNFNTSSPNTQDKESLSTLAEAAGREFEYEYPHRYPSPL
NYDMLYDQELSAANLITDLGRKKNVNIPGIDNINNAIFGEAQHRDGSNGEHPHQQHVTSM
HVRSASETFGMKTDPISAQPSPPLSASAATTGASAGVGGGTGVGGGTGVPGTVAVATGAP
SASTSGHPPPQTPPAPIVIPQFAPHSPPLSTLLSAVSQYEIKKSGLRFLPSKGQLNRYLS
VYFTCYHMTTPIIHPQSFNPQTASPALLFAVCAMGALFASEIEMSKKLNDLSCSLRRTVF
EQSEMSWASPVPIWATQTLLINVSYEMRVGDEPSLNFVEGTKTLLSNLVTQRVVEVENLE
FGWSNWIMQESSRRTYFAVFVLYGTMTCLFNHGPAIWNANVRPNLTLPCSESLWNASFSS
EQEWLQAYSQTVPPQTFRSSLEALCGIGDTSSSHYGLRILGTALFFEVWELKKREGANNT
SRDGSGEFSQNGSYTGHLGRALLKWQHCCKQLPPTVSGTVDLFASERLMIMIRAIIESSI
NPSTVSSVSLFRAHPMILEGHILTILSSIKLHSPPRQTLSLATFELSHCEELMVTETKII
EKCFELFHVPLLCGSQIFQSFMLKPLTFGMIDENIVSTFEICLVFIVWIDSIEKRIGRDL
STRELILWNTVQTSLIDSGIELSCHELAKRHGEPNRVSDMLTYSYAGGFAYFWADVLSAL
DTWGMAKVLSKSLCRIGKGLTERSVERRRSSTGT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG