YALI0E30723g

Overview

Description similar to uniprot|P15565 Saccharomyces cerevisiae YDR120C TRM1 tRNA methyltransferase
Locus type CDS
Locus tag YALI0E30723g

Location

Species Yarrowia lipolytica Positions 3614031..3615614
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1584 (nuc.)
Previous locus YALI0E30701g Next locus YALI0E30745g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30723g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30723gYALI0E30723g_mRNA-001YALI0E30723g_CDS-001

Nucleotide sequence

 

>YALI0E30723g
ATGACCGACGCCGACAAGTACACAGTGATTACTGAGGGCAAGGCCAACATTCTCTTCCCC
AAAGAGAACCAGGTGTTTTATAACCCCGTTCAGCAGTTCAACAGAGACCTCTCCGTCACT
TGCATTCGGGCCTGGTCTGAGATCTGGGCCGAAGAGAAGGCCAAGAAGAACAAGAAGCGA
AAGCGAGATGAGAAAGAAAATGAGGAGTCTGGAAAGCCTCACATTCCCGAATTCAACATT
CTTGAGGCTCTTTCTGCTTCTGGTCTGCGAGCCATCCGATATGCCAAGGAGATTCCTGGT
GTCAAGAACATCATAGCCAATGACTTCTCCAAGGACGCTGTTGCTAGCATTGAGAGAAAC
GTGGCTCACAACAAGGTCGAGGAGCTGGTCACCCCCAACGAATCCGACGCCAACCTCGTC
ATGTACGGCAAGCAGTTCCAGGTCATTGATCTTGACCCCTACGGATCGGCCACTCCCTTC
ATTGATGCTGCTGTCAGAAGCGTCGATGAGGACGGCCTACTTCTGGTGACTTGTACCGAC
CTAGCTGTTCTAGCAGGAAACTCCCATCCTGAAAAGTGCTTTTCTTCCTACGGAGGACAG
ACCTTCCATGGAGGAGATGCCACACACGAGAGTGCTCTCCGTCTCGTCTTGCATATGATT
GCCGGCACCGCTGCAAAGTACGGCAAGTGCATTGAGCCCCAGCTGTCGCTATCAATCGAC
TTCTACGTACGACTTTTTATTCGGGTTAAGACCTCCCCCATCAAGGTTAAGGAGCTCGCC
TCCAACACCATGGTCACGTACCACTGCACTGAGACTGGTCAGTGGAAGAACCAGTACTTT
GGCCGAAAGGTGCAGCGAGAAAAGGGACCCAAGTTCACATACAATACCATGGACCGATCT
CTGCCTGACTTCTCCGACCCAGAGCTCCACTACTACATCAACGGACCCATGTGGGGCGGT
CCTCTGCATAATAAGGAATTCATCGACAAGGCTCTCGAGGTGCACTCCACTCTCGATCCA
GATGTTTACGGAACCCTCAAGCGAATCAAGGGTATGCTTACGGTGGCCAAGAACGAGATT
TACGAGCCCTTCTACTTCTCTCCAGCTCGAATGAGCCAGCTTACCAAGTGCCCCAACTTC
AAGCAGGCTGAGCTGGCCTCGGCCATTCTGAACGCCGGCTACGACGTGTCCATGTCCCAC
GCCTCCCACGAATGCCTCAAGACTTCGGCTCCTTTTGATGTTATCATCGACATCTACAAG
TTCCATCTCAAGAAGCAGGGCCTGGAACTGTCCAAGAACCTCAAGCCCTGGGGCAGAAAG
CTCATGGAGACCCCTCTCAAGGGAGAGTACGACTTCACCATCCACCCCAAGGTTCAAGAG
ATGGAGAAGACGAAGAAGAGCCGAACTCTGGTCCGATACCAGGAGAACCCCACCAAGAAC
TGGGGACCCAAGGCCCGTGCTCAGGGAACTCACGTCTAAGGTGAGCATACAAAGGATTAC
CAGTGGTGTTAGTGCAACCCACATGTGCTGTCGCCTAGTAAAAAAATAAGCAAACATATA
CATGTAATATTATTATTCACTCAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30723g_CDS-001

Protein length: 493 aa.
Product: tRNA methyltransferase, putative

>YALI0E30723g_CDS-001 MTDADKYTVITEGKANILFPKENQVFYNPVQQFNRDLSVTCIRAWSEIWAEEKAKKNKKR
KRDEKENEESGKPHIPEFNILEALSASGLRAIRYAKEIPGVKNIIANDFSKDAVASIERN
VAHNKVEELVTPNESDANLVMYGKQFQVIDLDPYGSATPFIDAAVRSVDEDGLLLVTCTD
LAVLAGNSHPEKCFSSYGGQTFHGGDATHESALRLVLHMIAGTAAKYGKCIEPQLSLSID
FYVRLFIRVKTSPIKVKELASNTMVTYHCTETGQWKNQYFGRKVQREKGPKFTYNTMDRS
LPDFSDPELHYYINGPMWGGPLHNKEFIDKALEVHSTLDPDVYGTLKRIKGMLTVAKNEI
YEPFYFSPARMSQLTKCPNFKQAELASAILNAGYDVSMSHASHECLKTSAPFDVIIDIYK
FHLKKQGLELSKNLKPWGRKLMETPLKGEYDFTIHPKVQEMEKTKKSRTLVRYQENPTKN
WGPKARAQGTHV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG