YALI0E30679g

Overview

Description some similarities with uniprot|Q95TU2 Drosophila melanogaster LD23187p (CG6686-PA)
Locus type CDS
Locus tag YALI0E30679g

Location

Species Yarrowia lipolytica Positions 3609946..3611589
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1644 (nuc.)
Previous locus YALI0E30657g Next locus YALI0E30701g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30679g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30679gYALI0E30679g_mRNA-001YALI0E30679g_CDS-001

Nucleotide sequence

 

>YALI0E30679g
ATGCTAGACGAACGCCCCAAAGAGAAGATCAAAACCACGGCAGACGCCATCCGGGCCTAC
GAGGCCGCCGCCAGACGGGCCAGTGAGTTTGAGAAAATCAGGGTCAACAGCCAACATGCT
CAGAAGGACAAGCCCATGAACTTCGAGTCCTCCTACCCGCTGCTTCCTCTGGTGTTCGCC
ATTCTACCAGCAGTGGCCAGTGTCCTCTACGGCGACATTGCTAGCGGTCTACTCAGCGAT
CTACTCACACTCATTGTTGTTGGTTGGATTCTATGGTCTGTCAGCGAGACCTCGTGGAAG
TTTTACGTCAACTGCGCGCGCCACGATGCCAAATTACGAAAGCAAGCAGCAACAACGGTC
GCAATGGCAGCAGGAGGAACAGTTGGCGCCAACGTTCAACCCGCTACAACACAAGTGCCA
GGTGCTTCTCCGACCGGCCTACCTGCTTCAACTTCTGCTCAATCTGAAAGCCCCACAACA
ACAGCGCCACCTACAGCTACCAATTCACCAACAGGCTCCACAACGCGGCCTCAGTCACGA
GCCAAGCCCCAAGGAATGCCCTCACGATACTTTGCTGCAACTACCTATCTAGGTGCCCAG
GTTCTTGGGGCGTGTATAATCCACTATGCACGAATGAATCTGTCGGCAGGCACTAAGCTC
GTGTCCAATTTCAATATCTTGCTCTACCTGACAGTGTCTCTGGGTCGTGGTTTCATGCGG
CTCCACAAGTTCAACCCCAACAAGAGAGACTCTTCGTCTCCAAGTGGCTGGACCGACTCT
GACGAGCATCGCGAGTATGCCAAGCTGACAGGTCGACTGGGAGACCTCGATACCAAGATC
ACCAACAACGACGCCGTGTGGGAACGCGAGATCAATGAGATCTGGAGCGCCATCAACCAT
GTCGCTGTCCAATTGTCCAAAGTGAAACAGCGAGAACGTGACCGTGAACGTGAAAGAGAG
CGGGCGCGGGAGCGGGAGTTACAGAAGGAGAAGGACCGAACAGGCAAATTGCCTAAAATA
GACGAACGAGCTGAGGCCAGACGCGTGGATGAGAAGTCCAGCCTTCTCAGAGACCTCAAG
GAGCGACGACGTGATATCCGAGACCCCACATACCGAAGTGATACTCTAGTCAGAGAATCA
TCTTCTGGCTCAGCCAAGGAGTTGAAGCGTCGAGAACTACAGCGACGCACCTCCCGTGAA
TTTCGAGAGAAAGATTCACATCTAGAAAACGGGTCCAGTGGATCCCACAGATCTTCCAAA
CTATCCCGTCCAGGCACAGCTTCAGCTTCTCCTACACTTTACGAATTTGATTCTGTGAAC
GACGCAGAAAAGGCCGGAGGCGACATTACTTCCAAGGCCCAAGTTAAGGTACGGCAACTC
AGCCCGTCTTCGCCGTCACCCAAGTCTGTTTCTGTGTTAGGCATTGCACTTGCCATTATG
AGGGGCACGTTTTCTGCCCCTCTCGTCGTTTGTCGTGCACTGGTCAAGGAGGCCTTCAAG
GTTGTTTATGTCATACTCGCTAAGAGATTTGGACAACTGGAGGTAGCCTGATCACGTTCA
GGCTAAATACCAACAACACGCTATTTATATTTGGGTACAAGAAAAAGAGGTTCATATGGG
TTTAATATTATTGCTATTTTGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30679g_CDS-001

Protein length: 517 aa.
Product: Conserved hypothetical protein

>YALI0E30679g_CDS-001 MLDERPKEKIKTTADAIRAYEAAARRASEFEKIRVNSQHAQKDKPMNFESSYPLLPLVFA
ILPAVASVLYGDIASGLLSDLLTLIVVGWILWSVSETSWKFYVNCARHDAKLRKQAATTV
AMAAGGTVGANVQPATTQVPGASPTGLPASTSAQSESPTTTAPPTATNSPTGSTTRPQSR
AKPQGMPSRYFAATTYLGAQVLGACIIHYARMNLSAGTKLVSNFNILLYLTVSLGRGFMR
LHKFNPNKRDSSSPSGWTDSDEHREYAKLTGRLGDLDTKITNNDAVWEREINEIWSAINH
VAVQLSKVKQRERDRERERERARERELQKEKDRTGKLPKIDERAEARRVDEKSSLLRDLK
ERRRDIRDPTYRSDTLVRESSSGSAKELKRRELQRRTSREFREKDSHLENGSSGSHRSSK
LSRPGTASASPTLYEFDSVNDAEKAGGDITSKAQVKVRQLSPSSPSPKSVSVLGIALAIM
RGTFSAPLVVCRALVKEAFKVVYVILAKRFGQLEVA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG