YALI0E30283g

Overview

Description similar to uniprot|P53154 Saccharomyces cerevisiae YGL084C (ohnolog of YPL189W) GUP1 plasma membrane protein involved in remodeling GPI anchors
Locus type CDS
Locus tag YALI0E30283g

Location

Species Yarrowia lipolytica Positions 3571102..3572889
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1788 (nuc.)
Previous locus YALI0E30261g Next locus YALI0E30305g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30283g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30283gYALI0E30283g_mRNA-001YALI0E30283g_CDS-001

Nucleotide sequence

 

>YALI0E30283g
ATGTTCGATCTGGCGACGCTGGATACACGGCTGGGGCCCTCAGACGATGTCAAAAGACGC
GACGGTGTTATCGCCAAAGCTGGACCGTCGCGATGGAGATCTCCCGAGTTCATCGCATAC
TACATCATTCACCTGATTGCGCTGCCCATCATGTTCAAGGGTGCTTACGACGCGTCCAAC
CCACCCAATCCCAACTACGAGCTCATCAAGAAGGACCTGGAACCCGGCTGGATTTTCGGA
CGAAAGGTGGACAACACAGACCACCAGTATTCTGGTTTCAGAAACAACCTGCCGTACCTG
GCTGCTGTGATTGTGGCCCAGCAGCTGCTCAAGAAGCTGTTCAAGCTATTCAGCAACGAC
AGCCGGTTTTTCGATGTCGGCTTTGCATTTGTGTTTCTGATTGTGGCTCACGGGATCTCC
ACAGTGAAGATTCTTGCCATCATCATTGCAAACTACTTGATCGGAAGCAAGATCTCAAAC
TCCAACGCAGGAACAATTGCCACCTGGATTTTTGGAATCGCAATCTTGTTCGCCAACGAA
AAGGCGCTGGGATACCCATTCACCAAATACTGTCCCCCTCTGGCATTCCTGGATGACTAT
GCTGGTCTCATGCCCAGATGGGATGTCACATTCAACTTCAGCATGCTTCGAATGGTGTCG
TTCAATGTGGACCGATACCGCGCAGTTGATGGAACGACCGAACAATGGCCATTGGACACA
AAGGGAGAAATTGATCTGTCGAAGTCCAAGACCGGAGAAGGAGAGAAGAGTACCTCCCTT
ACTGCTTCCGATATCAGCGAGCGATCACGAATTGATATCAGTCACTCACCATCAACCTAC
TCCATGTACAATTACCTTCTCTATATGCTGTATAGTCCTCTGTTTATGGCGGGTCCTATC
ATGACATTCAATGACTTCATCTTCCAGCACAAGAAGGGCCCTCTGGCTTCGCTATCTTTT
AAGCGAGTCTCCGTTTACGCCTTGCGACTGGTGTTTTGCATCTTTGTCATGGAAACCCTG
TTACATTACTGCTACGTAGTTGCCGTGAGTCAGGAGAAGGCCTGGGATGGAGATTCGGCT
TTCCAGATCTCCATGATCGGTTTCTTCAACCTGAACATCATCTGGCTCAAGCTACTGATT
CCTTGGAGACTGTTCCGACTATGGTCCATGGTTGACGGAATTGATCCTCCAGAAAACATG
GTTCGATGCATGGACAACAATTTCTCCGCACTATCATTCTGGAGAGCTTGGCATCGGTCT
TTCAATCGATGGATCATTCGGTACGTGTACGGCCCCATTGGAGGTTCTTCGCGACCTGTG
CTCAACTCTCTTATCGTCTTCTCTTTCGTGGCCATCTGGCACGACATTCAGCTTAGACTG
CTTGTATGGGGTTGGATGGTGGTATTCTTCATCATCCCCGAGTTGACCGCTACCTTCATC
TTCAAGCGTCCTCAGTTTACGAGCAAGTGGTGGTTCCGACACCTCTGTGCTGTTGGAGCA
GCTCTCAACATATGGATGATGATGATTGCAAACCTGGTGGGCTTCTGTGTGGGTCTCGAC
GGCATGGGAGACATGCTCAGGCAAATGTTTGGAACCCGAGACGGCATCATATATTGCATT
AGTGCCTCATGCGCACTATTCGTTGGCTCTCAGGTCATGTTTGAGGTACGGGAGAGCGAG
AAGCGGCGTGGGATCAACATCAGATGCTGATTCTTATAATTTTGTAGACATTGTCATATT
ACCATAGCTAAAATTACTATGCTAAGCCTATTCATCTGTCTATGCTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30283g_CDS-001

Protein length: 570 aa.
Product: Plasma membrane protein involved in remodeling GPI anchors, putative

>YALI0E30283g_CDS-001 MFDLATLDTRLGPSDDVKRRDGVIAKAGPSRWRSPEFIAYYIIHLIALPIMFKGAYDASN
PPNPNYELIKKDLEPGWIFGRKVDNTDHQYSGFRNNLPYLAAVIVAQQLLKKLFKLFSND
SRFFDVGFAFVFLIVAHGISTVKILAIIIANYLIGSKISNSNAGTIATWIFGIAILFANE
KALGYPFTKYCPPLAFLDDYAGLMPRWDVTFNFSMLRMVSFNVDRYRAVDGTTEQWPLDT
KGEIDLSKSKTGEGEKSTSLTASDISERSRIDISHSPSTYSMYNYLLYMLYSPLFMAGPI
MTFNDFIFQHKKGPLASLSFKRVSVYALRLVFCIFVMETLLHYCYVVAVSQEKAWDGDSA
FQISMIGFFNLNIIWLKLLIPWRLFRLWSMVDGIDPPENMVRCMDNNFSALSFWRAWHRS
FNRWIIRYVYGPIGGSSRPVLNSLIVFSFVAIWHDIQLRLLVWGWMVVFFIIPELTATFI
FKRPQFTSKWWFRHLCAVGAALNIWMMMIANLVGFCVGLDGMGDMLRQMFGTRDGIIYCI
SASCALFVGSQVMFEVRESEKRRGINIRC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG