| Description | similar to uniprot|Q05022 Saccharomyces cerevisiae YMR229c RRP5 processing of pre-ribosomal RNA |
|---|---|
| Locus type | CDS |
| Locus tag | YALI0E30217g |
| Species | Yarrowia lipolytica | Positions | 3563825..3568597 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Sense |
| Chromosome | YALI0E | Total length | 4773 (nuc.) |
| Previous locus | YALI0E30195r | Next locus | YALI0E30239r |
Here is a representation of the structure of the locus YALI0E30217g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0E30217g
ATGAAACGAAAGCATTCTGAGGTGTCTGAGAAGACGAAATCAGAAAAACCGGAATACAAG
TCAAGCCTCAAGATGGAGGAGGGCGCGTTCCCCCGAGGAGGAGCTGGAGTGCTGTCTGCC
ATGGAGATTCGACAGACTGCCGATGAAGCTGCGAAGGACCTGTTCGAGGAATCACAGGCC
GCCAAGAGCTCCAAGAAGAAGGGTGGAAGAAAGGCAAAGCAGGCTGTGACGAGCGACATT
GTTGCGATCCAGTCTCTTTCTCTGGACAATATCTCTGTTGGTTCCATTATTCTCGGACGA
ATCGTCAATATCCAGTCCACCGCTTGTGTCGTTTCGCTGCCCAACAACCTGCATGGTTTC
GTGTCTTGTGTTCAGGTCAGTGAGGCACTCAACGCCAAAATCGAGGAGGGCGAGGAGTTC
GACCTTTCGGACTACGTCAAGGAGGGACAGTGGGTTCGAGCTTCTGTCGTCGATACCTCT
AACAAGCGTCTGGGTCTCAGTCTGCTGCCCAAGGATGTCAACAGGGATATTGAGGACAGT
GACATTGACGCAAACATGGCTCTGCAGGTTGAGGTCAAGTCGAAGGAGGATAAGGGTTAC
GTTGTTGCTACCGGTATCAAGGGCAAAAAGGGCTTTATCAAGGACACCGACGTTGAACTC
AACAAGGGACAAATCGTGTTGGCTTGCGTGCTTCGAATCAGTGGCCGAACAATCACCCTG
GACACAGAGCATACCGGTGAGGCCGTCCGGCAACTAGAGGACTTCTCCAGCGCTGTCGCT
GGTACCCCAGTCACAGTCGTCACCACCGATAAGCGAAATAACGGAGCAGTGGTTTCCGTC
TTCGGTTCCGTTGATGCCACCATTGATCCCTTCCAGGGATCCTTTGGCCTTGAGGAAAAG
ACTAGCTCTGTTGCCCGAGTTGTCGCTACTCTCGACCGTGGTGCCAGCGGCAAGCGAATG
CTTCTCTCTGCTCTGCCCCACGTCGTCAACTTGGAGGATGCTGACCCCAGAATCGGTGAG
GCTTTCCTTCCTGGACAAGTTCTGGGCGTCAAGGTCACTCATGTCGTTCAGCACGGTCTG
TTTGTTGAGCTCGCCGAGAACATTCCTGGTTTCATTCACATCTCCAAGCTCGCTGATGAG
AAGACCGATTCTACAGCCGACTACGAGGTTGGCCAGACTCTTGATGCCAGAATTATCGCT
TTTGCCCCCCAGGACGAGATGTACGTTTTGTCTTGTGAGCAGTCTGTCATGGATGCCAAG
TACATTGCCACCAGTGATTTGTCTGCTGGTGACAAGGTCGAAGGTACTGTAACTAGGCAT
CTCCCCAAGGGCGGTATTATCGTGGCACTGTCATCTTTCATCACCGCTGTTGTGCCTGCT
GCTCATCTTGTTGATGCCAAGATGGCCAACCCCGAGCTCAAATTCAAGATTGGATCCAAG
ATAAAGGGCCGACTTCTCGGTGTGGACAGCAGCGGTTGCCGAATGACCATCAAAAAGTCT
CTCTACAACTTGCCTAAGGACGATTTTATCTCCTACGCGTCTGAGATTGGCGACATTGGT
TCTGGAACAGTTGTAAATGTCAAGCCTGGAGGGTGTGTCGTCGAGTTCTGGGACAACTCT
CAGGCCTGGCTTCCTGCTGGAGAGGTGTCTGAGGCTTTCATCGCTGACATTACCAAGCAT
TGTCGAGTTGGCCAGACCGTCAAGATCCGAATTCTGGATATCAACCCTGAGAAGCAGTCT
ATGCAGGTCTCCTGCAAGCTCTCCAAGGTTGCCGCTGAGCATGTCTCTGGTGCCTACGAG
GGCATCTCTCTTGGAGACCTTGTTACCGGTAAGATCATTGACAAACGAGGTGACTTTGTT
ATCGAGATGACCGTTGGTGATGTCGATCTCACTGGCGTTGTTCCTCGAAACCTGCTCCCT
CCTAGTCACAAGAAGCTGCGTGTGGGAGACAAGCTGGAGTGCGTTGTCCTTGCCAAGCAG
CCGTGGATGAGCTCTATGACTCTCGGTGCTCATCCTGACATCATCAAGGGATACCATAAC
AAGACTCTGATCAAGGAGACTCCTTCTGTTGGCCAAACTGTCACCGGTTGGGTCCAGAAC
GTCAACCAGCACGGTGTCTTTGTGTCTTTTGCAGGTGTTGTCGGTCTTGCTCCTCAGGCA
TCTCTTAGTGATGACTCTTATGACAAGTTCCAGGTTGTCAAGGGTCGAGTGACTTCTGTC
AACGGCGACAAGTTTGCGGTCTCTATTGGAAAGTCTCTCAATGGTCCTGCCGTCAACCCC
GTTGACCCCAGCATCTCTACCATTGCTGACTACTCTGAGGGTAAGAAGACCGAGGGTATT
GTTACTGCTGTTCTCCCCTCCTTCGTCTCTGTCCGTCTTTCCGACAACCAGAACGGTCGA
ATCTCACTCTCTCAGCTCGAAACTCCTGTTGAGAAGGACGATAAGATCTCTGTGACCGTA
CTTGGTCCCTCTTCTCAGGGTGATCAGATCGAGCTGGCTACTAACGATGTTCGACTTTCT
ATCAATAATCTTGAGGAGGGCAAGGCTTACCCTGGTGTCGTTGTTCAGTCTACTGCGGAC
TCCATTTGGGTGGCTCTGTCTGCCTACATTGTCGGCCGTCTGGATCGAGCTGATGTTCAG
GAGGCTGACTTCGCTGATGCTGTTGGTGACCTTGTCGAGGTTTCTGTCTGCGGTATTGAG
GGTGACAAAGTCAAGCTTCGAGGAGCTCAGTCCGAGGAAAAGTCTGAGGGCTTCTCAGAA
GAGGCGCTGCCCGCCTCCAACGGACTTCAGGGTGCTCAGGTGACTGCTCGAGTCAAGAAG
ATTGAGGTTGACTACGTTCAGTGCACTATCAACGTCAATGGCAAGTCCTCCACTGCCACA
GCCTCTCTTGTGGATGCTGTCGATGATTACTCTCTCAAGCTCAGCAATGTCTACGACATT
GGTGAGACTGTTCCCGCTGTCATCTGCTCTGCCAAGGAGCCCTACGCCATTTGCATTCGA
AAGAACCCGGAGGGTGTCGATCCTCTCCCTTCGCTCCCCCTCAAGCGAGGTGACAAGGTC
AAGGGTGTCGTCACTGGTATTGCTGCCGGTATCTTCGTTGCTATTGGCCACGGCATCGAT
GCTCGAGTCAAGATCACTAACTTGTCCGACTCTTTCCTCATGGACTGGAAGAAGTATTTT
AAGATCGGTCAAATCGTCACTGGTCGAATCATGGGCTTCTCTGACAAGGGTCTCCCCGAC
ATGTCTCTCAAGCAGCGTCATATGACTGGTGACAAGCTCATTGAGGGTCCCCAGGATCTC
ACTGTTGGCCAGAAGTACGACGGTTCTGTCCAGCGAACTACCGACTATGGTGTCTTTGTC
AACATTGGAGACGCTACTGGTCTGTGTCATAGATCCGAGATTGCCGACACCCCTGTTGGT
GATTGCTCAGAGCTCTTTAATTCGGGTGACAAGGTCCGAGTTATTGTTCTCAAGATTGAG
GGCAGCAAGGTCTCGCTTGGAATGAAGGCTGCCTACTTCGAGGGTGATGAGGATGACAAT
GACGAGGAGGACAGCGATATCGAGATGGAGGTCGAAGAGGACTCCGAGGAGGATGAGGAA
GACAGTGAGGATGATGAGGACGAGGACGACTCTGAGGATGAGTCTATCCCCACCATTCGA
TCTACCAAGCAGCAGCAGAAGAAGGCCAAGTCCACTGCCATGGATGTTGGCTTTGACTGG
TCGGGAGACGTCTTCGGAAAGGAGGAGGAGCAGAATGGTTCTGATTACGATGATGAGTCT
GACGAGGAAGATGATGCCCCCAAGTCTCGAAAGAAGCGAAAGACTCAGATTGCTGACATC
ACTGCTGATCTTTCGACTGCCACCCCTCAGTCTGTTGGTGATTACGAGCGTCTGCTTGTT
GGCAACCCCAACTCCTCTGTTTTGTGGATCTCCTACATGTCTTTCGTCATGCAGCTCTCC
GAGCTTGAGAAGGCTCGAGAGATTGCCCAGCGTGCTCTTAAGACCATCTCTTACCGAGAT
GAGGATGAGAAACTCAACGTCTGGCTCGCTCTTCTCAATTTGGAGAACACTTTTGGCACT
CCCGAGTCCACCGACAAGACCTTCAAGGACGCTGCTCAGTACATGGACGCCGAGACCATC
TACATGAAGATGGCTGACATTTACGCTGCTTCTGACAAGAAGGACAAGGCAGACGAGGTC
TATGCCAAAGCTGTCAAGAAGTTCTCTGGCTCCATGGAGGCGTGGATCAAGTACGCCACT
TTCCTGTTTGATAACGAGCAGGCTGCGAAGGGCCGAGTTCTGTTGGATCGAGCCACCAAG
GCCCTGCCCAAGCGAGACCATCTCCAGTGTGCCATCAAGTTCGCCCAGCTTGAGTACAAG
TCTGGAGATGCTGAACGAGGCCGAACTCTTCTGGAGGGTCTGGTGTCTGTCTACCCCAAG
CGAACCGATCTGTGGTCTCAGTTTGTCGACTTTGAGATCAAGTATGGCCAGGACAAGACC
AAGATCGAGGCTCTGTTTGAGCGAGTTGTTGCCTTGCCCAAGTTGTCTCTCAAGCAGGCC
AAGTTCTTCTTCAAGAAGTGGTACCAGTACGAGGTTGAGTCTGACGACGACAAGGCCGCC
GAGTACGTCAAGGCCAAGGCGGCGGATTACGTTACTCAGCGAACAAAGGAGGATGAGGAG
GAGGATGAGGAGGAGGATGAGTAAAAGAACGGTGGATTGTTGGTTTGTGATAGTATTGGT
ATTAATTGATTATTAATGATAGAATTACGTTAA
Locus sequence
Up/downstream sequence
Protein length: 1568 aa.
Product: RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs, putative
Browse the locus neighborhood with JBrowse:
ATG