YALI0E30173g

Overview

Description similar to uniprot|P33296 Saccharomyces cerevisiae YER100w UBC6 E2 ubiquitin-conjugating enzyme
Locus type CDS
Locus tag YALI0E30173g

Location

Species Yarrowia lipolytica Positions 3560767..3561747
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 981 (nuc.)
Previous locus YALI0E30151g Next locus YALI0E30184g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30173g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30173gYALI0E30173g_mRNA-001YALI0E30173g_CDS-001

Nucleotide sequence

 

>YALI0E30173g
ATGGCGACCAAAGCAGCTAACAAACGACTAGTCAAGGAGTACGCGTCGATACAGGAAAAC
GCTCCTCCTTACATCACCGCGAAACCAGCAGAGAACAATCTCCTGGAGTGGCATTATCTC
ATCACAGGTCCCCCGGAGACTCCCTACGAAGGCGGACAGTACCACGGTGTGCTGCTCTTC
CCATCAGAGTATCCCTTCAAGCCGCCGGCCATCAAAATGATTACTCCATCAGGCAGGTTC
CTGCCCAACACACGACTGTGCCTGTCGATAAGTGACTACCATCCGGACACGTGGAACCCC
GCATGGACCGTGTCCACGATCCTGACGGGGCTGCTGAGCTTCATGACCTCAGATGAACAT
ACTGCAGGAAGTATGACATCCACAGAAGCTACCAAGCGGACATACGCCAGCGAGTCGCGC
AGATGGAACCTTCACGACAAGAGCTTCCAGACTCACTTTGGAGGAACCAAAGAGGCCGAG
CCTGCTCCTTTCGTGCCACCTAGACGAATTCCTGTGGTTGAGGCCGAGGGTTCTTCAACC
GACTCCTTGGCTAAGAGCACAGTCATCAACAAGAAGAAGCCACAAACGAACAAGCCTGCT
TGGACCCTTCAACAGAAGCTTCTCGTGGTTTTGGCGGTTATTCTCGCCTGGATTGTGGCA
GCTAGATTCCTCGGAAAGACAGCTAACTAAGACAGTAGATGATATCGTTGAGAGGAACAC
AGCACATTAGTGCGAGTGTTTGGAGATCACATGATCTGATATCACGTGCTTCTACGAGGA
TAATCACATGACCAATAGCCACACAGTCTCAGGTGTTTGCTGGAAAAGGCCTAAATCTAG
AAAGTTGCTATAGAAAGAGCATTAATGTCTGAATAGATATTACCAAACATGTCTCATATT
TCATAAAAGCGGGAGAATGTACATTCTTTTGTCATAAACACCAACCTACAGTATGTACTA
AGACAGTTCTTGTTTACCTCT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E30173g_CDS-001

Protein length: 230 aa.
Product: Ubiquitin-conjugating enzyme involved in ERAD, putative

>YALI0E30173g_CDS-001 MATKAANKRLVKEYASIQENAPPYITAKPAENNLLEWHYLITGPPETPYEGGQYHGVLLF
PSEYPFKPPAIKMITPSGRFLPNTRLCLSISDYHPDTWNPAWTVSTILTGLLSFMTSDEH
TAGSMTSTEATKRTYASESRRWNLHDKSFQTHFGGTKEAEPAPFVPPRRIPVVEAEGSST
DSLAKSTVINKKKPQTNKPAWTLQQKLLVVLAVILAWIVAARFLGKTAN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG