YALI0E29755g

Overview

Description weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1, 4-glucan glucosidase
Locus type CDS
Locus tag YALI0E29755g

Location

Species Yarrowia lipolytica Positions 3527952..3530007
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2056 (nuc.)
Previous locus YALI0E29733g Next locus YALI0E29777g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29755g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29755gYALI0E29755g_mRNA-001YALI0E29755g_CDS-001

Nucleotide sequence

 

>YALI0E29755g
ATGAACCTCTTTTCGTGTTTTCAGAATAGAAAAACGCAAACGGGGTCCACAACCCCGACC
GCGACAGCAGCAAGAAACACACCGAAGGAAAACACCTCGTCGGCAGGCTCAGATGAGAAA
CACACACTCGAAACCATTGCAGAGGGTCCGGAAACAACTTCTCCTTACAAGGCTAGCGCC
AGCCGGGGCGACCAGGTGCCAGGAACTCCAAAAAGTGAACTAGGAGGCTACTCCTTCACT
CCCCCAGCGCTCAAGGTACCCCCACCAGTGGCTGGACACAAGCATATCTCGTCTCCGAAC
GAAACAGGCTCTCCATACCTGCCGACTTCTCCATCCTTTAAGACTTCGCCTAGAATCGAC
GTGGATCTGGAAAGCCGAATGTCCACCTTCAACCCTTACTCCTTGTCACCCCCCTCATCA
GCTGACAATAACCTCAAGACCGCCCCTTCTTTGGATAACCAGAGCCTCGCCTCTGGTCTT
GGGCTGGGCATCCCCAATCTAAACCCTTCTCCCCCTGTTACCCCCGTCAAAGCTCACCCT
CTGAGTAACGAGGTGAAGATGGACATGGATAACGGATCTTCGCCTCCCGTACCTGAGAAG
GACCACCCCCGCACTCTGCGACCGAAGTCACTCCATGGAAGCCAGTCCGCCAGTAACAAC
ACTCGACAAGCATCTCCTCCCAAAATGGAGCCCATTCCCCGACCCCGACAGATCGTGGAC
TCGCCGTCGTTCACGTCGTCATACTCGCCCACAATGGCCCCCCGAATCTCTATGAGCTTT
GCTCGACAGTCGCGTCTAATTCCTCTGGACGTGCTCAAAAACTTCTCGTCCGACGACTTC
TTGGGCGATTTCCTCAAGGACACTTCGTTCCGAGAGTCCATGGACGCGTCCATGCTGTCC
TCTGGAGTGCCTGGCATCACTGACAGAGCCACCAACAGACAGACCTTTGCATCCTCCCAC
TACTCGGAATACTATGAGGACAACCCCGACCTGCAGTTGGAGCTGTCTCGAATGAGATCC
ATGTCTCGACAGGCCTCTCTCCACCACAAGGACAGCCGGTCAAACCGAACGTCGCAATAC
ACCACATACAACCCCAACAATGAGTACGAAGCTTATGACCACGACAAACTAGCCCGTGAA
CTCGCTAGAGAGATTGAGGGCGCCAGCCGGGAGTCTTGTGATCCCGGAAAGCCCAACGTC
AACAGACTGTCCACTGTCGCTGCTTCTGAAAACTCTGGGGGAGTTTCTGTGCCTCCATCT
GATTTTGGTTCTCCACGAAGCGAGATTCACCGAGAGCGAACTAACAACAACAACAACAAC
AACAACAACAACAACAACATCACCCAAAACAACCACCTCACGACCAGCCATAGCAACAAC
GGTGCTGATGGCTCTAACTTTACCCACGACTCCATCTCGACATCCAACTCCATGAACACC
ATGTCCAACATGACCAGTACCACGGCTAACACGACAATCAATAGCATTGGTGAGACTCGA
GATTCCAAGAGTGACGTGAAGACAGTCCCCGGCATCCCTCCCCACGCCAAGACTTCGGCA
TCTGCAACTACCACAGCCCCTACCATGCCTCCTTCTCCCCCCGTGTCAATGCGGGAGTCC
ATCAAGGACCTCCCCAATTACACCGTCACCCACTCCTACCGACCAATTCTCGAGGACGAG
ATTGAGGTTCGACGAGGTGACACTGTCAAAATCTGCCAGGAGTTTGATGATGGCTGGTGT
CTGGTAACCATTGTAAAGATGCGATCTGACGACCCCGAAAACCGACGATCTATCGGATCC
ACCATGGGATACAAGGAAGGTGTTTGCCCTCGAGCATGTCTTGCGCTTGAGGTGTAGCAA
TCAGCTCAACGGTTCACCAGGTTCCGGCCTTCCATCACTTCTCAGCTTTTGTTTCAGAGC
AGTATGGCTGCCATCCACCACAACTGAATAATGTCTTCTTCCCAGACCGAGCGGCTACGT
GACACTTATATGTCCTCCAGCAACACTCATACAGTATTATTTATTTATATAACACAAATT
AATTCTTGTCAGTTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29755g_CDS-001

Protein length: 619 aa.
Product: Conserved hypothetical protein

>YALI0E29755g_CDS-001 MNLFSCFQNRKTQTGSTTPTATAARNTPKENTSSAGSDEKHTLETIAEGPETTSPYKASA
SRGDQVPGTPKSELGGYSFTPPALKVPPPVAGHKHISSPNETGSPYLPTSPSFKTSPRID
VDLESRMSTFNPYSLSPPSSADNNLKTAPSLDNQSLASGLGLGIPNLNPSPPVTPVKAHP
LSNEVKMDMDNGSSPPVPEKDHPRTLRPKSLHGSQSASNNTRQASPPKMEPIPRPRQIVD
SPSFTSSYSPTMAPRISMSFARQSRLIPLDVLKNFSSDDFLGDFLKDTSFRESMDASMLS
SGVPGITDRATNRQTFASSHYSEYYEDNPDLQLELSRMRSMSRQASLHHKDSRSNRTSQY
TTYNPNNEYEAYDHDKLARELAREIEGASRESCDPGKPNVNRLSTVAASENSGGVSVPPS
DFGSPRSEIHRERTNNNNNNNNNNNNITQNNHLTTSHSNNGADGSNFTHDSISTSNSMNT
MSNMTSTTANTTINSIGETRDSKSDVKTVPGIPPHAKTSASATTTAPTMPPSPPVSMRES
IKDLPNYTVTHSYRPILEDEIEVRRGDTVKICQEFDDGWCLVTIVKMRSDDPENRRSIGS
TMGYKEGVCPRACLALEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG