YALI0E29711g

Overview

Description weakly similar to uniprot|P32901 Saccharomyces cerevisiae YKR093w PTR2 peptide transporter
Locus type CDS
Locus tag YALI0E29711g

Location

Species Yarrowia lipolytica Positions 3520847..3522721
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1875 (nuc.)
Previous locus YALI0E29689g Next locus YALI0E29733g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29711g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29711gYALI0E29711g_mRNA-001YALI0E29711g_CDS-001

Nucleotide sequence

 

>YALI0E29711g
ATGACCTACGACGACAAGGACGACAACTTCAAAGCTACCATGTACCCTTCACAGGGGGAG
TACCTTTCTGAGGTTGAGCAAGTTGAGTACAATCCTCAGGTTGAGTACGACTCCCATATT
GACTACAGTCTGGACCCCACTCCGGAGTTTCCCGAAAATGGGACTCTCAAGGACGCTCTC
AAGGACACACTAGCTACGACCACCTCTGTCAATGACGAGTCAGTCCGAGAGGGAAGCGTT
GACCCCAATAATGAGAAGGATGGAATCGACTACGAGTATGAGGAGATCTATATGGAGCAC
GAGCATTACTCTCACACTTGGGCCAACTACACCGACGAGTGGAATCCTAATGGGTTGAGA
AAGGTTGAGGATGGAGATATCGCACTCCGAAGAGTCTCTGGACCAGTTCCAAAGATTACC
TACGTTTTGGCACTTGTGGAGTTTGCCGAACGAGGCTCTTACTACGGTCTTACAAACGTC
ATCTCCAACTTTGTTCAGTTTCCTCTTCCAAAGGGGGGCAATGGCTGGGGAGCTACCCCG
AAGGACTCTCAGCTTACAGCTGGAGCTCTCAACCAGGGTCTTCAAGTAGCCACGGCTATT
ACTCTTGTTCTCAATTTCCTTTCCTACCTGACACCTCTTCTTGGTGCTTATCTTGCGGAT
GCCAGATACGGACGATACCCCACTATTTGGGCAGGAACTATTGTTTGTGGAATTGGACAC
GTTATTATCGTTATTGCTGGTGTTCCTGGAGTGATTGAAGCCCAAAAGGCTTCTCTGGGT
CTATTCATTGCGGGTCTGATTATCTTCGCGTTTGGAACCGGTCTGTTCAAGCCCAACTTG
CTTCCGTTAGTGATGGAACAGTATCGAGAAGACGATGATTGGGTCAAGACACTTCCATCT
GGGGAACAAGTGGTGATAAACAAGGAGACCACTCTGCAGAGAATGACCCTGGTTTACTAC
TGGGCTGTCAATGTCGGTGGTTTCCTCGGTCTGGGCACTGCTTATGCTGAGAAACGAATT
GGTTACTGGCTCGCCTTTCTCGTACCTACTATCCTCTACTTCTTCCTACCTGCTCTTCTC
TACATCATCCGAAACATGGTGTACAAGGTCCCGTCCTCTAAAAACTCCATCATTGCTGGC
TTCTGTGGTGTCATTTACCAGTACATTTTCCGCAAGAAGTCCACCTATCCTCCCAAGTTT
GTGCACGATGTCTGGTCCACTCTTAAAGCCACTATGTTCTTTCTCTTCTACCCCGTCTAC
TTTATTAACGACAACGGTATTGGTGCCCTTTCGAACTCCCAGGGTGCTTCCATGATCACC
AACGGAGTGCCCAATGATCTCATTAACAACTTCAACCCGTTAACTATCATTGTGTTTGTG
CCTATCATCAACTATGGATTGTATCCGCTGCTTCGAAAGATGAGAATCAACTTCAGAGCT
TCCTTCCGTATCTTCCTGGGATTCATGCTCGCGGCTTTTTCTCCAATGATTGGAGCTATC
CTGCAGTGGCAGATATACGAGACATCTCCTTGTGGATACTACGCGACCAATTGCGAGGAA
GGTGTAGCCCCAATTACAATCTGGTGGCAGGTGTTCCCCTACTTCTGTACAGCACTGTCT
GAAATTTTTGCAGTAACTACTTCTTATGAGCTGGCCTACCATCTGGCTCCCTACAAGTTG
AGATCCATCGTCCTTGCTCTGCTGCTGTTCATGTCTGCACTCAGTACAGCAATCCAGACA
GGTATCACACCTGCTCTTAAGGATCCATACCTCATCTGGCCATTTGTGGGTATCTGTTGT
GCCGGTGTTGTTTTTGCAATTGCTTTCATCATCATCTACTGGAAACTCGGAAAGGGATTG
TCCACCAAGCTATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29711g_CDS-001

Protein length: 625 aa.
Product: Conserved hypothetical protein

>YALI0E29711g_CDS-001 MTYDDKDDNFKATMYPSQGEYLSEVEQVEYNPQVEYDSHIDYSLDPTPEFPENGTLKDAL
KDTLATTTSVNDESVREGSVDPNNEKDGIDYEYEEIYMEHEHYSHTWANYTDEWNPNGLR
KVEDGDIALRRVSGPVPKITYVLALVEFAERGSYYGLTNVISNFVQFPLPKGGNGWGATP
KDSQLTAGALNQGLQVATAITLVLNFLSYLTPLLGAYLADARYGRYPTIWAGTIVCGIGH
VIIVIAGVPGVIEAQKASLGLFIAGLIIFAFGTGLFKPNLLPLVMEQYREDDDWVKTLPS
GEQVVINKETTLQRMTLVYYWAVNVGGFLGLGTAYAEKRIGYWLAFLVPTILYFFLPALL
YIIRNMVYKVPSSKNSIIAGFCGVIYQYIFRKKSTYPPKFVHDVWSTLKATMFFLFYPVY
FINDNGIGALSNSQGASMITNGVPNDLINNFNPLTIIVFVPIINYGLYPLLRKMRINFRA
SFRIFLGFMLAAFSPMIGAILQWQIYETSPCGYYATNCEEGVAPITIWWQVFPYFCTALS
EIFAVTTSYELAYHLAPYKLRSIVLALLLFMSALSTAIQTGITPALKDPYLIWPFVGICC
AGVVFAIAFIIIYWKLGKGLSTKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG