YALI0E29491g - SSA-Ep

Overview

Description uniprot|Q6C458 Yarrowia lipolytica YALI0E29491g SSA- Ep Hsp70 protein
Locus type CDS
Gene name SSA-Ep
Locus tag YALI0E29491g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3493518..3494190
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 673 (nuc.)
Previous locus YALI0E29469g Next locus YALI0E29506g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29491g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29491gYALI0E29491g_mRNA-001YALI0E29491g_CDS-001

Nucleotide sequence

 

>YALI0E29491g
GAACGTGCTTAGCAAACCCTTTCTTCTTCGGCTCAGACACCGATTCAGATTCATTCTCTA
AGTTTGAGCTGTCCGGAGTTCCTCCTGCTCCCTGAGGTGTTCCTTCAATTGAGGTCACCT
TCGACGTTAATTCCAACGGTATTCTCAACGTCTCCGCTGTTGAAAAGAGTACTGGTAATA
CCCAGCAGATCACTGTTGCAAGGACAAAGGTCCACTTTCCAAAGAGCAATTTGAGCGAAT
GGTGAACGATGCTGAAAAGTACAAGGACGAGGATGAGAGAGAAAGTCAGCTCGAATTGCC
GCCAAAATGGCCACAAGTCTTTCTCCTTCTCCCTCAAGAACACTCTCCGAGAACAAGTTC
AAGGGGAAGGTCTGTGAAGCGGACCGAGAGAAGCTCAAGAAGGCTATTAACGAGACCATC
GAATTCTTAGATGCTACACAATCCAGTGCCAGTGAAGAATACTCCGATAAGCAGAAGGAG
CTTGAGAGTTTTTCCAACCCTATCTTGATGAAGTTTTACGGAGTCTCTGGAGGTTTCCCT
GTCGCAGGTGAGGGTGCTGCCCATTGCGGCGGCAAGTGCCCTACCGTGGTGGAGGTTGAC
TAAGTCATGAGTGCTACAGTAGTCACATGTACATGCAAAATATTATAGAATAATTTATGA
TCAATTGATCAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29491g_CDS-001

Protein length: 202 aa.
Product: Hsp70 protein
Gene: SSA-Ep

>YALI0E29491g_CDS-001 ERA*QTLSSSAQTPIQIHSLKFELSGVPPAP*GVPSIEVTFDVNSNGILNVSAVEKSTGN
TQQITVARDKGPLSKEQFERMVNDAEKYKDEDEREKSARIAAKMATSLSPSPSRTLSENK
FKGKVCEADREKLKKAINETIEFLDATQSSASEEYSDKQKELESFSNPILMKFYGVSGGF
PVAGEGAAHCGGKCPTVVEVD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG