YALI0E28941g

Overview

Description weakly similar to uniprot|P53868 Saccharomyces cerevisiae YNL219c ALG9 mannosyltransferase
Locus type CDS
Locus tag YALI0E28941g

Location

Species Yarrowia lipolytica Positions 3429694..3431453
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1760 (nuc.)
Previous locus YALI0E28930g Next locus YALI0E28963g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28941g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28941gYALI0E28941g_mRNA-001YALI0E28941g_CDS-001

Nucleotide sequence

 

>YALI0E28941g
ATGATATCCACCGGCGACTTTGCGATACTGTGCCTGTTCATCATTGCGCGACTGGTGTCG
GCGAAATACAGCATCATTCCCGACTGCGATGAGGTGTTTAACTACTGGGAGCCTCTGCAC
TTTCTGACGCATGGATTCGGAGCACAGACATGGGAGTACTCTCCCGAGTACGCCATTCGG
TCTTGGGCATACCTGTGGGCCCATGGAGTGGCAATTAAGCTGTCAGAACTCATTCTGAGT
GCCACGGGTCTCCAGCCCAAGTACTTCATCTTCTACGGCCTGAGAACGGTGTTTGCCACT
GTATGTGTGCTCTGCGACTTTGCGCTGTACAGATCGGCCAAGAAGAATCTGTCCAGCTCA
ATTGCGGTCGGATACGCTGTTATTTCGGCCTCCAGCACAGGAATGTTCCATGCAAGTGTG
GCATTCCTGCCTTCGACCTTTGCCATGAATTGCGTCACTCTGGCCATGTCGCAGTTCCTC
AACATCAGTCCCACAGGCTTTGTGAGCAGCTACTGTCGTGGCTTTGTGCTCATTGCTGTT
GCTGGTATTCTCGGATGGCCTTTCGCTCTTGCTGTGGGTGCTCCTTTTGGCCTTTACTAC
CTGCTTAACATCACCCACCCCAATGCTTTTGCTGGCCTGCTGAAGGCCCTCATGGCTATC
GGCACTATCGCAGGTATTACTCTGGCCATTGACTCAGTTTCATACCGTTCCCTTCAGCTT
GGCACACTAAACATTGTGCTCTACAACGTATTTGGAGGAGAAGGACAAGGTCCCGAGATC
TTTGGAGTGGAGGACTGGAAGTACTACCTGCACAACCTGCTGCTCAACTTCAACATTGCT
TACCCACTTTCTATTCTTGCTTTTGCGACGCCTGTTTTGTTTTACCTGCTTCCTGCCTCC
TCCACATCCCTCAGGGTCCATCCTGCTAGACTCGCACTGACTACCTCGCCTCTCCTGCTG
TGGTCTGCGATCTTCTACATGCAGCCCCACAAGGAGGAGCGGTTCTTCTACGTGGTTTAC
CAGCTAATTGCTCTTTCTGCTGCCATTTCGCTGGAATGGATCTCTGCTGTTGTCCATGCA
GTTGGCCTCAAGGGTCTCAAGGCCCTCACAATCGCTCTGGCTCTGTCGGGCATCGCCTCC
ATCTCCGTGCTAAGATCCGTGTCGCTCGCCCAGAACTACTCTGCGGCTATTCACGTGCTC
AAGACCCCCCAGCTCTACGAGGGTGAGGGAACCACCTTCTGTCTAGGTCGAGAATGGTAC
AGATTCCCGTCCTCGTACTTTCTGGCTCCTCACCAGCGACTGCGATTTGTCAAGTCGGGC
TTCAAGGGACTTCTACCCACAAGCTTTGAGGAGTCAGATTACCCTAACATGTGGTGGAAC
CTTCCAGGAACCTCCAGTATCCCTCTGCACATGAACAACCTCAATCTGGAAGCTCCCGAG
CTGTACGTAGAGCCTTCTCAGTGCGACTTCGTGGTTGACATCGATATTCCTGCCAACAGT
GAGGAGGGCGAGATTTCGTATTTTACCTCCCCCGAGTGGAAGAAGATCAACTGTCGCAAG
TTTTTGGACTTCGAGTCCAGCGGTCCTGGAAAGCTCTTGTGGCTGCCAAAGAGTCTTCAT
GGCCTAACCAAGACCAGCCTGAAGCATCATGAATATTGTCTATTTGAGAAGGTGAAGAAC
GAGTAAATAAATAATTCCCTCTTCGTGGTTTCACTTGCGCTCAATTCCTATATATAACAA
TCCTCTATTTTTTTCGATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28941g_CDS-001

Protein length: 562 aa.
Product: Conserved hypothetical protein

>YALI0E28941g_CDS-001 MISTGDFAILCLFIIARLVSAKYSIIPDCDEVFNYWEPLHFLTHGFGAQTWEYSPEYAIR
SWAYLWAHGVAIKLSELILSATGLQPKYFIFYGLRTVFATVCVLCDFALYRSAKKNLSSS
IAVGYAVISASSTGMFHASVAFLPSTFAMNCVTLAMSQFLNISPTGFVSSYCRGFVLIAV
AGILGWPFALAVGAPFGLYYLLNITHPNAFAGLLKALMAIGTIAGITLAIDSVSYRSLQL
GTLNIVLYNVFGGEGQGPEIFGVEDWKYYLHNLLLNFNIAYPLSILAFATPVLFYLLPAS
STSLRVHPARLALTTSPLLLWSAIFYMQPHKEERFFYVVYQLIALSAAISLEWISAVVHA
VGLKGLKALTIALALSGIASISVLRSVSLAQNYSAAIHVLKTPQLYEGEGTTFCLGREWY
RFPSSYFLAPHQRLRFVKSGFKGLLPTSFEESDYPNMWWNLPGTSSIPLHMNNLNLEAPE
LYVEPSQCDFVVDIDIPANSEEGEISYFTSPEWKKINCRKFLDFESSGPGKLLWLPKSLH
GLTKTSLKHHEYCLFEKVKNE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG