YALI0E28721g

Overview

Description weakly similar to uniprot|A2QGN2 Aspergillus niger ssDNA binding protein
Locus type CDS
Locus tag YALI0E28721g

Location

Species Yarrowia lipolytica Positions 3408570..3409051
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 482 (nuc.)
Previous locus YALI0E28699g Next locus YALI0E28743g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28721g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28721gYALI0E28721g_mRNA-001YALI0E28721g_CDS-001

Nucleotide sequence

 

>YALI0E28721g
ATGTTCCGATTCACTCGAAAATTCACCACCTCTGCTGCTGCCCGAGACGCCTTCAAGGTC
ACTCTCCATGGCCGTATCGCGAAGGCCCCCGAGACCCTGACCTCCGCTGCTGGCAACCCC
TACATCAAATACACCGTTGCTATCAACGACTTCCGAGAGGATCGACCCGCTTCTTTCATC
TCCGTCACCTCTTTTGAGGATCGAGCCGCCCAATTCCTCAGCGTTCTCAAGACCGGAACC
CCCGTCATGGTCACTGGAAACGCTACCTACCAGTACCCCCCCAACTCCGAGATGGGAGAT
GGAAAGTACCCCTACCTTAGCGTCACTCAGAGTAAGTATCACAGAATCCGTTACAAATGG
TGCATCCGAAGCAATTGACTAACACAGCCTCCATCGACGTCATCTCCGGCAAGAAGCGAG
ACGAGACCGTTGAGTAGATGTATTAATATTGTACCAGCTGCTTGCAGCGCTTATTGTAAC
GA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E28721g_CDS-001

Protein length: 127 aa.
Product: Conserved hypothetical protein

>YALI0E28721g_CDS-001 MFRFTRKFTTSAAARDAFKVTLHGRIAKAPETLTSAAGNPYIKYTVAINDFREDRPASFI
SVTSFEDRAAQFLSVLKTGTPVMVTGNATYQYPPNSEMGDGKYPYLSVTQTSIDVISGKK
RDETVE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG