YALI0E28556g

Overview

Description weakly similar to uniprot|C5E3X2 Zygosaccharomyces rouxii ZYRO0E00946p
Locus type CDS
Locus tag YALI0E28556g

Location

Species Yarrowia lipolytica Positions 3387383..3388809
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1427 (nuc.)
Previous locus YALI0E28548g Next locus YALI0E28578g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28556g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28556gYALI0E28556g_mRNA-001YALI0E28556g_CDS-001

Nucleotide sequence

 

>YALI0E28556g
ATGACGACGATAACGTGGAATTTCAAGTCTGTGAAGCTGCCCACAACTCCAATGATGCCT
TTGACCACTCTTAGAGATCAGGCTGTGACTCATTTCCAGTTGGAGGGCAACTTTGGACTA
AAAAAGACCTCAACCCTGGCTGCAGGCAGAAAACCCGCCGCCACCCTGCTTGATTTGAAC
GATACTGTTCGATTGGCAAACTTTGCGCAGGGACAGAAGCTGGAGCTCGTGAGATTGGGC
GCGAAGAAGACTGCATCACCAGCACCAGTCGCCACACAACCGGCTACCTCAGAAACGAAC
AAGGTGGTTGCTCCAGCAACGCCTCAGAACAATATGCTGTCTCCAGTCTCTGTGACACCA
GAAGATGCCACCGAGTCTACTGACTCTCCTCAGACCAGCACCACACAACCTGATCATGGG
TTTACTCCGTCAACAGCCCCAGCCTCTACTACTTCCTCTACTGCAGCTCCCAAGAAGCTG
CTTGTGAACGCCTCTCTATCTGTGGTCTCGCTACCGCCCTCTTTCAGCGAATCTCTGCAC
TCACAATTCCCCCCTTCTACGACGATCGGGCAAATGCTCGATTTCTTCCAGCAGAAATCG
GGTATCAACTTCCAGCGAAAGCTGGACATCCGCGAAGCTGAAGATGGCCATAAGGTTGAC
CAGGAGAGTTATATCAGACAGGGAACTTACAATGTCGAGTTCATGGATGGCCATGAACAG
GCCAATGAAAGCGAGAACCCTGCTTCCAAATCAGTCAAGGTTTTCGAGGCAGGTAAATCA
ACTGTGCCTACTGACGATCATGACTTTGAGCCAACTACTGCTCATGCACATGCTTATATC
AGCACCATCCGCAAGACTGGAGGCACCAATAAGAGTGGAAGCACACTTTTGACGGAAAAG
CTGCGAGATCAGCAGAGGCAGGCAAAAATCAACCAGTTGGGAAGTGTCAAGGTGCGACTG
AGATTCCCTGATGGAGTCTATGTAGAGACAGAGTACTCAAAGAATGACACGGTGGGTTCT
ATGGTTGATACCGTCAACAATGTCCTGGGAGGAGATCAGAAGTTCAGACTATGGCAGAGT
TATCCTCGTAAGGAGCTCAACGACGTTTCTCTGCGCTTGATGACTGACCTGGGTTTTCTT
ACCAACACTTTGGTAACTGTTGAATTCCCAGGATTAGCCAAGTTTGATTCTAAGGCTGTG
TTGAAGCCTGGAGTTGTTGTGGAGACCCCCAAGCCGGTAGAGAGTGATACAAAGGGAGAT
GTTCCTTCCTCTGGAGGTCCCTCTACTACTGAGGCCAAGCCCAAAAGGAAGATGACCGGT
ACTCCCAAATGGCTCAAGCTAGGCAAAAAGTAATAGTTCTCATATGTACGAGTATGTACG
GGGGTGTATATATAGATGAATGTATGGAAATGCATGGGTTGGTATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28556g_CDS-001

Protein length: 451 aa.
Product: Conserved hypothetical protein

>YALI0E28556g_CDS-001 MTTITWNFKSVKLPTTPMMPLTTLRDQAVTHFQLEGNFGLKKTSTLAAGRKPAATLLDLN
DTVRLANFAQGQKLELVRLGAKKTASPAPVATQPATSETNKVVAPATPQNNMLSPVSVTP
EDATESTDSPQTSTTQPDHGFTPSTAPASTTSSTAAPKKLLVNASLSVVSLPPSFSESLH
SQFPPSTTIGQMLDFFQQKSGINFQRKLDIREAEDGHKVDQESYIRQGTYNVEFMDGHEQ
ANESENPASKSVKVFEAGKSTVPTDDHDFEPTTAHAHAYISTIRKTGGTNKSGSTLLTEK
LRDQQRQAKINQLGSVKVRLRFPDGVYVETEYSKNDTVGSMVDTVNNVLGGDQKFRLWQS
YPRKELNDVSLRLMTDLGFLTNTLVTVEFPGLAKFDSKAVLKPGVVVETPKPVESDTKGD
VPSSGGPSTTEAKPKRKMTGTPKWLKLGKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG