YALI0E27390g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E27390g

Location

Species Yarrowia lipolytica Positions 3241974..3244729
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2756 (nuc.)
Previous locus YALI0E27368g Next locus YALI0E27412g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27390g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27390gYALI0E27390g_mRNA-001YALI0E27390g_CDS-001

Nucleotide sequence

 

>YALI0E27390g
ATGAAACGACTCTGGGGGACCCTGCCCCGAGTCAAGAGAGTGCGCCACCAACGCGCAATA
GGGATGCTATCAACTAAAAAATCTCATGCTCGACAAATACATCAACACACGTTTTATCCA
GTAGCTACCGACCAAGCATTTTCACAGCTCGACCCCCAGAAGAAAAAACGGGCTGATCTC
GGAACCTCAGTGCCGCTATATCTGCCACCAGAGGCCTGCGGATTACGACAACTAGCTGCC
GGAGACTTCGTCGAAGCTATTGTCGCTGGAATACCATACTGGGGAGTAGTTACGACACGA
CAACCATTCACCCTGGAGATGCTGGACAGCGATGGAATCAACAGAGAAGTGCCAGTGGAT
TGCGTCACGTTTGGGCTCTACGGCTTCACAGAATTGACAGGCAAGAAGGAGCGACTCGCA
CTTCTGTCGAACTATCTTAATTCGGTCTCCTACTATCACAGTGTAGCAATGCGGAAGCTT
TCGACCATCCATTCACTCTTTGCTAAGCAGGCAATCCCGTGGTCTGTCGGGCTGGACGAA
ATAACCGAGACCCTTCTCAAGATCTCTCCGGCAATAAATGCATACTCTTGGTCCGCTGCG
GCTTTGGCTTCACATATCGCCGTCGTCAATCAGCCGCGCTACTTCAGATGTGACTATGCT
CAGACAGCAGATTATGACTCCTGGTCACCCCTCAATTACGTGGCTCTACCTATCGATATC
GTGAGCAAACTGGAACTGGTTGTCCATCCTGACAATGCTGCCAGATCAATCAAAGAGTTC
ACAGCAATTGCTCTGAGATATATGGAATCTACAGAGCATGTTCAGCATCGTCATTTGCCT
CTCAGGGCACTATTTACGGCCAAACAGTCGTATGACACCTGGGATGCCGTAGTGGTGTTC
CTTCGACATTACGTGGAGTATCCTCACCGTAACCTCATGTGGGTTGTTCCTGAGATTCTT
GGTAGCTGGTATCGAGACAGGTACGAGGGCCATGGAGACCCCTATGACCCGTATGTGGTT
CGAGAGTTCTTGGAAAGAATCAACGAAACGACCCCCAGTGGTCCAGGATCAGTATTCCTC
GCTGGTCCGAACGACATTGCATTTACAAAACATAGACTGCCTGCAGATACGACGGTGGCA
GCCGAGGAGCTCGAGCTAACAGACGGAAATTCAACATTCTTCGACTACTGCAGTCAAAAG
TTTACTGAGTGGGAACCATACACATCCGTGTCCGCAGCCCAATTTCTACATAAGTGGAGA
GACCCGGCATACCTGCTAGATCGTCACATTGGCTTCGGCATATATGTGGAGAACGGGGTG
CCAGAATTCCTCCATCTGCATGTTCCTGACGTCACCCAAACTGTTCCAGTCAAGTCTAGC
GTGCTATCTGTGGTCGGCCAGCGAAGTTATTCTCTCGATACAGTAGAGGGTCGACTAGAC
ATGCTTCCAGGAGCTGTAGCTGACGAGCTGGCTCTCACAGGAGAGGGCAGACGACGAGTC
ATGACGGTCACTGTAAGACTACAGGATGGCAAGCTCCCTGAGAGCATCACACCGGATCTA
CTTTTCGTATCTTTCGGTACGGTCGAGTTCGAAGAACTAACAGAGTCAAACAACTCCAGC
CGAGCTTTGACAGAGCTGCTACAAGAACATTACGACTACCGACTATCTCACGGAGCACTT
CCTGGGTTTGCCAAGTCTAACAAGAACGTCAGCTTGTCTTACCAGGTTGGAGAAGTATCT
GAGCTGCCCAAGTCAATCTTCCTTAGCTCGGTCGAATACCAGAAAGACGATCAGATCGCG
CCACGGAATGAAAAGGTTTCGATTTTGCATGCTACCGAGGACTTGGATGTGTTGAGCGAG
GCTCGCATTCTCATGAACCGACTCGGAGCCATCTACGCGTCTGAAAACAAGCTGGCTGTC
ATGTATCGACAGCAGCAGGACCCCTTGCACGCGGAAAAGTCGGATCATCCGCTCAATCGA
AAGATCCAGTCTCTCTATTTCGAAAAGGAACATTTTTCGGACACACCCGGTCCCCATGAG
TCCCTCGGACTGGATTCTGTTATACAGATTGCTTCTCCCATCGACTCCCTGGAGGACATT
GTGAATCAGCATCAGCTGTATTGCAAATACGCCAACCTGTGCGCATCGAGAAGACATGGA
GAAGACGTGGTGAACTTAGCAACTCTTCGAGGAACACCCAAAGTAGACTGGCTTGCGCCT
GCTGGAAAGGAGGAATACACACCTCTTTCAGACAGATGGCATGATATCCAGGACGATGTG
TGTGACGTTCTGGAGGAGGAGACCCCTCGAATGATTCTGGAGCTGCCTCAACCTCTCTCT
GCTGGACAGCTTCGAAGTGTCTACTTACAGTACCTGCGACCTCGACAACGGTTGACTGAC
CGGGCAGCTCAACTGGTTGAACGATACTGGAAGATTCTGTGGATCGAAACGCAGAATAAC
TTTGCATACAAGTGTGTTGTGACTCGACCTGCTCTTACCTATAAGCGAGATCCTATCACC
AAGCTGTCTACACGAGCGCGGGCTTATTGCATTGATTTGGACATGGAGGTTGAGGTTGAG
GTTGGAGATCTTCAGCTTGAGCGAGGAGATCGGCTTGTCAGCATGGGAGTTGTGCGCGCT
AATAAATACACTGGAGAGCTGGTCCTGTGTGTTTAGGTGTAGAGGAGTTTGGTAAAGGAT
GATAAGGGAGCATTTGTATATAGTAAATCATGCATTAATCTATGAGTTTCGTTGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27390g_CDS-001

Protein length: 892 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E27390g_CDS-001 MKRLWGTLPRVKRVRHQRAIGMLSTKKSHARQIHQHTFYPVATDQAFSQLDPQKKKRADL
GTSVPLYLPPEACGLRQLAAGDFVEAIVAGIPYWGVVTTRQPFTLEMLDSDGINREVPVD
CVTFGLYGFTELTGKKERLALLSNYLNSVSYYHSVAMRKLSTIHSLFAKQAIPWSVGLDE
ITETLLKISPAINAYSWSAAALASHIAVVNQPRYFRCDYAQTADYDSWSPLNYVALPIDI
VSKLELVVHPDNAARSIKEFTAIALRYMESTEHVQHRHLPLRALFTAKQSYDTWDAVVVF
LRHYVEYPHRNLMWVVPEILGSWYRDRYEGHGDPYDPYVVREFLERINETTPSGPGSVFL
AGPNDIAFTKHRLPADTTVAAEELELTDGNSTFFDYCSQKFTEWEPYTSVSAAQFLHKWR
DPAYLLDRHIGFGIYVENGVPEFLHLHVPDVTQTVPVKSSVLSVVGQRSYSLDTVEGRLD
MLPGAVADELALTGEGRRRVMTVTVRLQDGKLPESITPDLLFVSFGTVEFEELTESNNSS
RALTELLQEHYDYRLSHGALPGFAKSNKNVSLSYQVGEVSELPKSIFLSSVEYQKDDQIA
PRNEKVSILHATEDLDVLSEARILMNRLGAIYASENKLAVMYRQQQDPLHAEKSDHPLNR
KIQSLYFEKEHFSDTPGPHESLGLDSVIQIASPIDSLEDIVNQHQLYCKYANLCASRRHG
EDVVNLATLRGTPKVDWLAPAGKEEYTPLSDRWHDIQDDVCDVLEEETPRMILELPQPLS
AGQLRSVYLQYLRPRQRLTDRAAQLVERYWKILWIETQNNFAYKCVVTRPALTYKRDPIT
KLSTRARAYCIDLDMEVEVEVGDLQLERGDRLVSMGVVRANKYTGELVLCV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG