YALI0E27346g

Overview

Description highly similar to uniprot|P16140 Saccharomyces cerevisiae YBR127c VMA2 H+-ATPase V1 domain 60 KD subunit, vacuolar
Locus type CDS
Locus tag YALI0E27346g

Location

Species Yarrowia lipolytica Positions 3239100..3240672
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1573 (nuc.)
Previous locus YALI0E27324r Next locus YALI0E27368g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27346g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27346gYALI0E27346g_mRNA-001YALI0E27346g_CDS-001

Nucleotide sequence

 

>YALI0E27346g
ATGACTTCTGCACGAATGACGGACAAGGAGCTCTTTGAGCTCAACAAGTCTGCTGTGACT
CAGGACTTCCGAATCACCCCCCGACTCTCTTACAACACCGTTGGCGGTGTTAACGGTCCC
CTTGTCATTCTTGACAACGTCAAGTTCCCCCGTTACAACGAAATTGTCAACCTGACTCTT
CCTGACGGTTCCGAGCGAGCCGGTCAGGTACTGGAAGTCCGAGGCTCCCGAGCCATTGTC
CAGGTCTTTGAGGGTACCTCTGGTATTGATGTCAAGAAGACGAAGGTCGAGTTTACCGGA
GAGAACCTGAAAATTGCCGTGTCCGAGGATGTGCTGGGACGAGTCTTTGACGGTTCCGCC
CGACCTATCGACAACGGCCCCAAGGTATTTGCCGAAGACTACCTCGATATTAACGGCTCC
CCCATCAACCCCTACTCTCGAATCTACCCCGAGGAAATGATTTCCACTGGTATCTCCACC
ATCGACACCATGAACTCCATTGCCCGTGGCCAGAAGATTCCCATTTTCTCCGCCTCTGGT
CTGCCACACAACGAAATCGCCGCCCAGATTTGTCGACAGGCCGGTCTGGTCCGACCCACC
AAGGATGTCCATGACGGACACGAGGAGAACTTCTCTATCGTCTTCGCCGCCATGGGTGTC
AACCTGGAAACCTCACGATTCTTCAAGCAGGATTTCGAGGCCTCCGGTGCCCTGGAGCGA
ACCTCCCTGTTCCTCAACTTGGCCAATGACCCCACCATTGAGCGAATCATTACTCCCCGA
CTGGCCCTCACCACCGCCGAGTACCTGGCCTACCAGACCGAGCGACACGTTCTCACCATT
CTTACCGATATGTCTTCGTACGCCGACGCCCTGCGAGAGGTTTCTGCCGCCCGGGAAGAG
GTGCCCGGTCGACGAGGTTACCCCGGTTACATGTACACTGATTTGTCCACTATCTACGAG
CGAGCTGGCCGAGTCGAGGGCCGAAACGGTTCCATCACCCAGGTGCCCATTCTCACCATG
CCTAACGATGATATCACTCATCCTATTCCCGATCTTACCGGTTACATCACTGAGGGCCAG
ATCTCTGTCGACCGACAGCTCTACAACCGAGGTATCTACCCTCCCATCAACGTTCTTCCC
TCTCTGTCTCGTCTCATGAAGTCGGCCATTGGTGAGGGCCGAACCAGAAAGGACCACGGT
GATGTGTCTAACCAGCTGTACGCCAAGTACGCCATTGGTAAGGATGCCGCTGCCATGAAG
GCCGTTGTCGGTGAGGAGGCTCTGTCTACCGAAGACAAACTGTCTCTGGAGTTCCTGGAC
AAGTTTGAGAAGCAGTTTGTGTCCCAGGGCCCCTACGAGGACCGATCCATCTTCGAGTCC
CTTGACCTTGCATGGGAGCTTCTGCGAATCTACCCCAAGGAGATGCTCAACCGAATCTCT
CCTAAGATCATCGATGAGTTCTACGACCGAGAGTCCGACGAGTTTGCCGGCAAGGATACC
GAGGAGATTATTGAAACCGAGAATCTCATTGATGCCTAAGTACTAATAAATCATGTTGAA
TTAAGCAGCTTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27346g_CDS-001

Protein length: 513 aa.
Product: B subunit of the peripheral membrane domain of V- ATPase, putative

>YALI0E27346g_CDS-001 MTSARMTDKELFELNKSAVTQDFRITPRLSYNTVGGVNGPLVILDNVKFPRYNEIVNLTL
PDGSERAGQVLEVRGSRAIVQVFEGTSGIDVKKTKVEFTGENLKIAVSEDVLGRVFDGSA
RPIDNGPKVFAEDYLDINGSPINPYSRIYPEEMISTGISTIDTMNSIARGQKIPIFSASG
LPHNEIAAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETSRFFKQDFEASGALER
TSLFLNLANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREE
VPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQVPILTMPNDDITHPIPDLTGYITEGQ
ISVDRQLYNRGIYPPINVLPSLSRLMKSAIGEGRTRKDHGDVSNQLYAKYAIGKDAAAMK
AVVGEEALSTEDKLSLEFLDKFEKQFVSQGPYEDRSIFESLDLAWELLRIYPKEMLNRIS
PKIIDEFYDRESDEFAGKDTEEIIETENLIDA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG