YALI0E27159g

Overview

Description weakly similar to uniprot|P53389 Saccharomyces cerevisiae YNR055c HOL1 member of major facilitator superfamily multidrug-resistance protein subfamily
Locus type CDS
Locus tag YALI0E27159g

Location

Species Yarrowia lipolytica Positions 3215728..3217689
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1962 (nuc.)
Previous locus YALI0E27137g Next locus YALI0E27181g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27159g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27159gYALI0E27159g_mRNA-001YALI0E27159g_CDS-001

Nucleotide sequence

 

>YALI0E27159g
ATGAAAGTCGACAGTGAAGTCATTCCTGGAACCATCCAATTGGTCGATCTCAAGGGAGAC
CCCGATTACAATGCCGTAGACCACGAGATTGTGCTGGTGCCTACTCCCTCGGCTGACCCA
GACGATCCTTTGAATTGGTCTCAGCGAAGAAAGTGGCTCTCCATGCTGTGTATGGTGTTG
TACACCCTTGGAGTTGGAGTTCCCACTGCCTCCATCTTCTCGGTACTGCTGCCCATCTCA
GAGAAGACCAACTTGTCGCTGGCTGACCTCAACGAGGGTACCGGATATATGTTCCTGATG
CTGGGTTTCGGCTGTCTTTTCTGGCAGCCGGTGGCTCTACAGTTCGGAAAGAGACCTGTC
TACCTCATCTCTATCCTGGGAACAATGGCAGTCCAGATTTGGGCCCCCTATACCAAGAAC
AACGGTCAGTGGATTGGTCATAAGATTCTGCAGGGTTTCCTTGGAGCTCCCATCGAGTCT
CTATGTGAAGTCACAGTCTCCGATATTTGGTTCGAACACGAGCGAGGCTCCTGGATGGGC
CTGTACGCCTTCATGATGCTGTTCGGCTCCTTCATGGCCCCCTTTTTTGGAGGTTTTATC
ACCCAGGGTATGGACTGGAAATGGGTGCTCTTCTGGGGTGCCATCTTCGACGCAGTGGTT
TTCGTTTTTCTTTTCTTCTTCTTCGAGGAGACTAACTACTCTCGAAAGGCTGAGCTGGAG
CGAGAGTGCATGGAGAGCGAGACTCTGGACGTTGCTCATGGTGGAGCCGTTCTTCCTGTG
GGATCAGGATCTTTCAACGACTCTAGCGACCAGAACGAGAAGGGATCTGCTAACCGAGTG
GACGTCATACCCAACCCTTTCTCTAATGGAGAGACTGCTGCTTGCGGTGTGCCTGCCAAG
ATCTACAAGCCCAAGACCTTCTGGGACAAGCTGAAGCTGTTTGACAAGCCCAGACCCAAC
ATGTTATGGACCATGGTCAAGCGTCCAATCATCATTCTCTTCTCTTTCCCTCCGGTCATC
TACGCCGGCTTCCTTTACGGTACCGGTCTGATTTGGTTCTCCGTTCTCAACGCTACTGCC
TCCAAGATCCTATCTGAACCCCCCTACAACTTCAAGCCCTCAATGGTCGGTGTCGCCTAC
TTGTGTCCCACCATCATCACCGCTATTGTCGCCTGGTACGGGGGATGGCTTGGAGACAGA
CTACGTATCTGGATGGCCAAGCGACACGGAGGTATATCTGAAGCCGAGGATCGACTCTGG
CTCTTGGCACTCTATATGGTCATGTGCCCCGCTGGTCTCATTCTCTGGGGTATTGGCGCT
GCCCATGGCATCCACTGGTTTGGATTGGTCATGGGTCTTGGTATCACTGGAGGCTTCGGC
GTGCTTGCTGGTCTCTGTTCCGTCAATTACGCTGTTGATTGCTATCGGGAAATGGCTTCG
GAATCCATGGTTCCTCTTATTATCATCCGAAACTGCATGGGTTTCGGTATGGGCTACGCC
ATCACCCCCTGGCTCACCAATGAGGGTCTCCAGCGATGTTTCGGAGAGGCCGCCGGAGTT
TCAGTCTTTTGCATCGGAATGTTCTTGTTCATGATAGCCTTTGGCAAGAAGTTCCGAATC
GCTACTCGACACAGGTACTGGAAGTTTGTTCAGGAGAGTATCGAGAACGACATGGCCCAC
TAAGAAGACCCAACTCACAAAAAAAGTACCCTCCCTCATATCTAATCCACAAGTAATATT
TATCGTATAAAAGATACTACAAGTAGTTTGAAGTTGGTTTGAAGGTACTTGCACTTGTGG
TGATTCAGGAATTGTTGTCGAAAAGTCGAAAGTCGACTGATGTGGTTTAGGAAAACGGCC
CAGCCGGTGTTGAAATACTTAGTGCTTGTACTTGTACAAGTATATATATAGACCTGCAAT
TTGGCACCTCTATTGATGAGATTCCTGAATAAAATTTACTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27159g_CDS-001

Protein length: 561 aa.
Product: Conserved hypothetical protein

>YALI0E27159g_CDS-001 MKVDSEVIPGTIQLVDLKGDPDYNAVDHEIVLVPTPSADPDDPLNWSQRRKWLSMLCMVL
YTLGVGVPTASIFSVLLPISEKTNLSLADLNEGTGYMFLMLGFGCLFWQPVALQFGKRPV
YLISILGTMAVQIWAPYTKNNGQWIGHKILQGFLGAPIESLCEVTVSDIWFEHERGSWMG
LYAFMMLFGSFMAPFFGGFITQGMDWKWVLFWGAIFDAVVFVFLFFFFEETNYSRKAELE
RECMESETLDVAHGGAVLPVGSGSFNDSSDQNEKGSANRVDVIPNPFSNGETAACGVPAK
IYKPKTFWDKLKLFDKPRPNMLWTMVKRPIIILFSFPPVIYAGFLYGTGLIWFSVLNATA
SKILSEPPYNFKPSMVGVAYLCPTIITAIVAWYGGWLGDRLRIWMAKRHGGISEAEDRLW
LLALYMVMCPAGLILWGIGAAHGIHWFGLVMGLGITGGFGVLAGLCSVNYAVDCYREMAS
ESMVPLIIIRNCMGFGMGYAITPWLTNEGLQRCFGEAAGVSVFCIGMFLFMIAFGKKFRI
ATRHRYWKFVQESIENDMAH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG