YALI0E27115g

Overview

Description similar to uniprot|B6H8R7 Penicillium chrysogenum Pc16g04490
Locus type CDS
Locus tag YALI0E27115g

Location

Species Yarrowia lipolytica Positions 3212093..3213590
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1498 (nuc.)
Previous locus YALI0E27093g Next locus YALI0E27137g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27115g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27115gYALI0E27115g_mRNA-001YALI0E27115g_CDS-001

Nucleotide sequence

 

>YALI0E27115g
ATGTGGTCCCTTATTTTCGTCGTGATCTCCCCTGCTCTGGCCTGGAACACAAACGCCACA
GACACACTCTACCCCGAGGAAGTGCCAACCAAGCCTTACTACCAGGGCTACCAACTTCCC
GTTGGTAGCAAGCATGCTACACCTCGAAATATCGAGTACGGAGGCTACAACTACTGCTCC
ATGCCCCATCCTCACATCGACACCTATGAGCTGCCAGCAGCAATTCTCAATGGCTCTGTT
CGAGGAAGTATGGCTGGATTGACCTATATTCAGAGACACCAGAAACGGACATCCTACCAC
ACCTACCAAGACGAGGACATCCGGTACGATTGTTCAGAGCTTGTTCCTTTTTTGTTTGGT
GAAAATCGTGACTCCACAGGGCTCTTGAACGCTGCTATTCCCGTTCACGATTATGTCTAC
ACACCCGACTCCAATCCATACGTAAGTTCGGGATACGTACCCCATGGAAGCTGCCAGTTC
CCCCAATTGACCATCGGGGGTCTGGAGGACGGCTTCCAGCATGGTAGAGATCTGTGGAAT
GTATATGGAGATAAGATGGGTATCATTCCTGCAGTCCCCAGTTTGGACCACATCTGGCTT
CGACGATCCAATAAGGATCTCACAGCCCAGACCGCGGGTGGAGTACTTCGGGGGTTGTGG
CCAAACCACAACGAGACGCTGCCCATCCACCAACAGCGAGCCGAGGTGGACACAATTGGA
TCAAACTACCCTTGCGAAAAGCGAGACAAGCTGAAGAAGGATCTCAAGAAGACGGACATC
TGGAAGGAGCACGATGAATTCATGGTGCCCGTGTTGGACGAGCTGCACAAGACTGTGTTT
GGCGAGTCCGACTACAAGTATGAGAAATGGAGTGATACCTTCCAGTCTCGTCTCTGCAAT
GGTTATCCTCTCCCATGTGCAAACAGTACCTCTTGTGCTTCTGGGAATGCTGCAGCCCAG
GTCTTCTCTGGTGAGGACTGGGAGTTCTACCAGCAGTACATTGCAGATCCCAATGCTGCC
GAGTATGCTCGTCTGAAGGTTGGCCTTCTTGTCGGTGAGATTATTGATCAGCTCAAGGAG
ACCGTTTACAACCATTCGAGTGTGGTATACAGACACTACTTTGCCCACGATGGAGATCTA
GCCCCTATGGCAACTACTCTGGGGCTGCAAACCATGAAACAGCCTGGAATGGGCATTAAC
ATAGCGGTGGAGTTGTGGAAGGTGGAGGCTGTCGATGACAACGAGTCAGAACAGATTCCC
CTCCCTCCTATCACTAATCAGAACGAACACTATGTCCGTGTTCTGTGGGCCGGTGCCCCC
ATTCGATCCAAACTTGGAAATCTTGAGTGGATCAAATTTGATGAGTTTGTCGATCTGTGG
AGTAAGTCGGTGCCCATCGATATTGTAGAGGAGTGCAAGGTCACCAAATAATTACGGATC
AATTACAAATAGCCACAAATAAATAAATAGATGTGGATATATTCTGCTGTTACTCTCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27115g_CDS-001

Protein length: 477 aa.
Product: Conserved hypothetical protein

>YALI0E27115g_CDS-001 MWSLIFVVISPALAWNTNATDTLYPEEVPTKPYYQGYQLPVGSKHATPRNIEYGGYNYCS
MPHPHIDTYELPAAILNGSVRGSMAGLTYIQRHQKRTSYHTYQDEDIRYDCSELVPFLFG
ENRDSTGLLNAAIPVHDYVYTPDSNPYVSSGYVPHGSCQFPQLTIGGLEDGFQHGRDLWN
VYGDKMGIIPAVPSLDHIWLRRSNKDLTAQTAGGVLRGLWPNHNETLPIHQQRAEVDTIG
SNYPCEKRDKLKKDLKKTDIWKEHDEFMVPVLDELHKTVFGESDYKYEKWSDTFQSRLCN
GYPLPCANSTSCASGNAAAQVFSGEDWEFYQQYIADPNAAEYARLKVGLLVGEIIDQLKE
TVYNHSSVVYRHYFAHDGDLAPMATTLGLQTMKQPGMGINIAVELWKVEAVDDNESEQIP
LPPITNQNEHYVRVLWAGAPIRSKLGNLEWIKFDEFVDLWSKSVPIDIVEECKVTK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG