YALI0E26631g

Overview

Description weakly similar to uniprot|D5G4M9 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0E26631g

Location

Species Yarrowia lipolytica Positions 3162576..3163795
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1220 (nuc.)
Previous locus YALI0E26620t Next locus YALI0E26653g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26631g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26631gYALI0E26631g_mRNA-001YALI0E26631g_CDS-001

Nucleotide sequence

 

>YALI0E26631g
ATGAGCCAAGATCTGCTATCGTGGGATCCGTTCGCACCGGTGGCTCAGCCGCCTCCACCC
CAAGCTGCTCCGGCCGCGGTAAAAGACGACGATGACGACGACGACGAGTTTGGCGACTTT
GAAGAGGCCCCGTCGGCCCCTATTGATATGCCAAACCCACCACCACCCAATCCCATGCCA
GCTATGGGTGGCCACTCCATGGCAAAAAACCTGTCACCACAGAAGAAGAAACCGCTGATC
CAGGACTCGATCAACAACATGGGTGCTCTTAGCCCTGGCCAGAGCATCAAGTTTGGCCAG
CATCTGAACCACGGCTCCAAGAGCTCTGCGGACTGGAACGGGATTCTGGGAGCCAGACCA
GGCGACAGAAAGTCGTACCATGGCCCCCAGAAACACCAGCATCAAGAAACACAGACTAAC
AAGCAACCCAGACCGACACATACCAACTCACCTTCAACTACATTCGACTGGGACGATTTT
GAGACGACCTCTCCGACTATTGAAGCAAAAGCAACCCCCAAAGTTGCTCCACCCGCGAAC
GTAACACCATTTAGGCAGATTTCAACTCCTCACCAACTGCTCACATACCTGCACACCAAC
TGTTTGCCTGTAATGGATAAGCTGGTTCAACAGCTCCAGCCTCTGACATTCCCGCTCAGA
AAACGAGTCCTGGCCCACCCCACAACTAAGAAGTTTGTGGAACGATATATCGATCTGGTC
TACTTAGCAGCCCGAATCATGGCTGGACGAATGCGCAAACTGAGAATCATGTGTGAAAAT
GGCATTGAAGGAATGTCGAAAAACACTTTCGCGGACTTAATGAAGAAATCAGACAGAGAC
GCCCGGGAAATATCTCGTGTCTGGAAACCTCTAAGTGCTGCCATCGGACCCATGACAAAC
CACAGACAGCTGCCCATCCTGCAACCCGAGTTTCTCATTGCCAATGAAGATACACCTCCT
AAACAGCTGGAATCTGTCTGCTGTATCTGCGGTCTCAAAAACACAGAGTTCATCCGAGGC
CACCCTAAGCCCAAGTTCAACGCCCAGCAAAACGCCCACTTCTCTTGCATCAGCTGGTAC
AATAATCTTCCGGTTTTCGGCATCAGTGGAGTGAGACAAGCGGGAGAATCTTCCTTTACT
GGGGATCTCATTTGAGGCGCAATCATCATATATTTAATTAATTGCATTTATAAACAAATT
ACATCTCAAAAGATTTTTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26631g_CDS-001

Protein length: 385 aa.
Product: Conserved hypothetical protein

>YALI0E26631g_CDS-001 MSQDLLSWDPFAPVAQPPPPQAAPAAVKDDDDDDDEFGDFEEAPSAPIDMPNPPPPNPMP
AMGGHSMAKNLSPQKKKPLIQDSINNMGALSPGQSIKFGQHLNHGSKSSADWNGILGARP
GDRKSYHGPQKHQHQETQTNKQPRPTHTNSPSTTFDWDDFETTSPTIEAKATPKVAPPAN
VTPFRQISTPHQLLTYLHTNCLPVMDKLVQQLQPLTFPLRKRVLAHPTTKKFVERYIDLV
YLAARIMAGRMRKLRIMCENGIEGMSKNTFADLMKKSDRDAREISRVWKPLSAAIGPMTN
HRQLPILQPEFLIANEDTPPKQLESVCCICGLKNTEFIRGHPKPKFNAQQNAHFSCISWY
NNLPVFGISGVRQAGESSFTGDLI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG