YALI0E26543g

Overview

Description weakly similar to uniprot|Q9URQ3 Saccharomyces cerevisiae YLR316c TAD3 subunit of tRNA-specific adenosine- 34 deaminase
Locus type CDS
Locus tag YALI0E26543g

Location

Species Yarrowia lipolytica Positions 3150441..3151810
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1370 (nuc.)
Previous locus YALI0E26521g Next locus YALI0E26565g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26543g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26543gYALI0E26543g_mRNA-001YALI0E26543g_CDS-001

Nucleotide sequence

 

>YALI0E26543g
ATGTCGGAGTTCGTCCACAAGCTGAAAAGCAATCCCCGAAACAACGTCATCGACGACAGT
TTCTGGCAAATCAAGTACCAGGACGACCACCGAGGCCTGGAACTCATCCCCCTACTAACT
ACAACCATTCCTGCAAACAAGTCTGGAGTGGTGGTGAAGTAAGTATCTGAAGATCCAAGT
CGCACACGATCTATTCCTAACACAGACTTATCAAAGACCACGTCGACGAAGATGCCCATG
ATCTTGGACATCTGCGTAGAATCGCCAAAGAGGCTGATTTGATCAAGGAAGGACAAGTTG
AAGGAGAGACGGCAGACTCAACCGAAAAGAAACCCGCCAGCGAGGTATTTCTGAGAGTGA
TCATCGCGTCTAAGGACACAGAGGTTGATTTCGAGACTATCAAGGCCGGAATCACCGCCA
TTCTCAGCTACGAGCCGCCCTTTCATACTGACTATGCATCGAAGTACCTGCCCTTCACCA
AACAGGAGTCTGTGGAGTGGTCGAGAAACGCCTGGCCAATCATGTGGAGAGGTAATACAG
CAGCTATACAAACCAAGTTGTCGGATTCTGAGCTCTCCGAGATGAAACAGAAACTCAACG
AGGTCATTGCTCTGAGTAAAGCCAACTCTGGAACGAAAGAACTGCCTGTAGCCACTCTGA
TAGTGGACCCCAAGACGGGAGAAGTGCTTAGCCGAAAGCTCGATACTCGACACAAACAGG
GTAACCCTCTGAACCACTGCACGATGGAAGCCATTGCCGAAATCGCGTCCCAGGAGCTTG
CTAGACGCCAGGAAAGAGGCACTAGCAAGCAGGAGAGAGAAAGAGAAGGAAAACAAGAAA
CAATTGACGGAGAAGAAGATGACAGACTTTATCTGTGTCTGGAAATGCATGTGTACACCA
CCCATGAGCCATGTCCCATGTGCGCCATGGCTCTGAACCATTCCAGAGTTGGACGACTGG
TGTACGTTGAGTCTAGCCCTGGGTCTGGAGGAATCGAACCCAACTCAGGAGGTAGCCACG
GTATCCACTGGAACCCGCAGCTGAACTGGAAGTATGAGGTGTGGAAGTGGGTTGGAGACG
ATTTGGGGGTTGAAAAGGTGGATGAGAGTGTTAACGCGTAATCTGACTGCGCAGTACGAG
TGCTTAGGATAGTCACCAACTGAGCACGGGAGACCTGTGTATGTGATGTGATTTAAGAGC
ACAGCTCAGATGTCTCATGAGCAGACACAATGGTCACCCACAACCGGAGACTAATAGAAC
ACTTCCGGAAGAGTGTGTACATATATGTATTAGCATATTGACCAGACAATGATGGGGGTA
GGTACTCGTACCATGCTCGATTGCTAGCTACAAGTAGTTACAGACGTGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26543g_CDS-001

Protein length: 358 aa.
Product: Conserved hypothetical protein

>YALI0E26543g_CDS-001 MSEFVHKLKSNPRNNVIDDSFWQIKYQDDHRGLELIPLLTTTIPANKSGVVVKLIKDHVD
EDAHDLGHLRRIAKEADLIKEGQVEGETADSTEKKPASEVFLRVIIASKDTEVDFETIKA
GITAILSYEPPFHTDYASKYLPFTKQESVEWSRNAWPIMWRGNTAAIQTKLSDSELSEMK
QKLNEVIALSKANSGTKELPVATLIVDPKTGEVLSRKLDTRHKQGNPLNHCTMEAIAEIA
SQELARRQERGTSKQEREREGKQETIDGEEDDRLYLCLEMHVYTTHEPCPMCAMALNHSR
VGRLVYVESSPGSGGIEPNSGGSHGIHWNPQLNWKYEVWKWVGDDLGVEKVDESVNA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG