YALI0E26477g

Overview

Description highly similar to uniprot|P04912 Saccharomyces cerevisiae YBL003c HTA2 histone H2A
Locus type CDS
Locus tag YALI0E26477g

Location

Species Yarrowia lipolytica Positions 3142986..3143500
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 515 (nuc.)
Previous locus YALI0E26455g Next locus YALI0E26499g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26477g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26477gYALI0E26477g_mRNA-001YALI0E26477g_CDS-001

Nucleotide sequence

 

>YALI0E26477g
ATGTCTTCCGGTGGAAAGTCCGGTGGCAAGGCCGCCTCCTCTTCTAAGACCTCCAAGTCT
CGATCCGCTAAGGCCGATCTTACCTTCCCCGTTGGTCGAGTCCACCGACTCCTGCGAAAG
GGAAACTACGCCCAGCGAATTGGTGCTGGTGCCCCCATCTACCTCGCTGCCGTCCTTGAG
TACCTCGCCGTCGAGATTCTCGAGCTGTCCGGTAACGCTGCCCGAGACAACAAGAAGAGT
CGTATCGTTCCCCGACATCTGCAGCTCGCCATCCGAAACGATGAGGAGCTGAACAAGCTG
CTTGGCCACGTCACCATTGCTCAGGGTGGTGTTCTCCCCAACATCCACCAGAACCTTCTG
CCCCGAAAGTCCGCCAAGGGCGCCAAGGGTGCTTCTCAGGAGCTCTAAGTCTCTTGAAGG
CTTTATATTTTATCTATTGGGTTTTGGGTTGTTTTAATGTCCATTAAAACTGTTTACAGT
GTACTATAATGAATGACATGTATTGTATTTTATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26477g_CDS-001

Protein length: 136 aa.
Product: Histone H2A, putative

>YALI0E26477g_CDS-001 MSSGGKSGGKAASSSKTSKSRSAKADLTFPVGRVHRLLRKGNYAQRIGAGAPIYLAAVLE
YLAVEILELSGNAARDNKKSRIVPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLL
PRKSAKGAKGASQEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG